Gene : Eucgr.D00299 E. grandis v2.0
Defline:  (1 of 1) PTHR22792:SF58 - LA-RELATED PROTEIN 6A Genomic Order:  231
Name:  ? Eucgr.D00299 Secondary Identifier:  ? PAC:32051248
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D00299 0.5kb upstream 0.5kb upstream 7148 true Chr04: 5237064-5244211 Eucalyptus grandis
Eucgr.D00299 0.5kb upstream 0.5kb upstream 500 false Chr04: 5237064-5237563 Eucalyptus grandis
Eucgr.D00299 0.5kb downstream 0.5kb downstream 7148 true Chr04: 5237564-5244711 Eucalyptus grandis
Eucgr.D00299 0.5kb downstream 0.5kb downstream 500 false Chr04: 5244212-5244711 Eucalyptus grandis
Eucgr.D00299 1.0kb upstream 1.0kb upstream 7648 true Chr04: 5236564-5244211 Eucalyptus grandis
Eucgr.D00299 1.0kb upstream 1.0kb upstream 1000 false Chr04: 5236564-5237563 Eucalyptus grandis
Eucgr.D00299 1.0kb downstream 1.0kb downstream 7648 true Chr04: 5237564-5245211 Eucalyptus grandis
Eucgr.D00299 1.0kb downstream 1.0kb downstream 1000 false Chr04: 5244212-5245211 Eucalyptus grandis
Eucgr.D00299 2.0kb upstream 2.0kb upstream 8648 true Chr04: 5235564-5244211 Eucalyptus grandis
Eucgr.D00299 2.0kb upstream 2.0kb upstream 2000 false Chr04: 5235564-5237563 Eucalyptus grandis
Eucgr.D00299 2.0kb downstream 2.0kb downstream 8648 true Chr04: 5237564-5246211 Eucalyptus grandis
Eucgr.D00299 2.0kb downstream 2.0kb downstream 2000 false Chr04: 5244212-5246211 Eucalyptus grandis
Eucgr.D00299 5.0kb upstream 5.0kb upstream 11648 true Chr04: 5232564-5244211 Eucalyptus grandis
Eucgr.D00299 5.0kb upstream 5.0kb upstream 5000 false Chr04: 5232564-5237563 Eucalyptus grandis
Eucgr.D00299 5.0kb downstream 5.0kb downstream 11648 true Chr04: 5237564-5249211 Eucalyptus grandis
Eucgr.D00299 5.0kb downstream 5.0kb downstream 5000 false Chr04: 5244212-5249211 Eucalyptus grandis
Eucgr.D00299 10.0kb upstream 10.0kb upstream 16648 true Chr04: 5227564-5244211 Eucalyptus grandis
Eucgr.D00299 10.0kb upstream 10.0kb upstream 10000 false Chr04: 5227564-5237563 Eucalyptus grandis
Eucgr.D00299 10.0kb downstream 10.0kb downstream 16648 true Chr04: 5237564-5254211 Eucalyptus grandis
Eucgr.D00299 10.0kb downstream 10.0kb downstream 10000 false Chr04: 5244212-5254211 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063245 5270 Rosid View MSA
123739352 5271 Pentapetalae View MSA
122791823 5272 Eudicot View MSA
122043814 5273 Angiosperm View MSA
121349510 5274 Embryophyte View MSA
123427383 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.0528 0.0 25.193   Low
cufflinks 14.3777 0.0 32.2634    
cufflinks 14.4733 0.0 32.4554    
cufflinks 12.7903 0.0 28.8204    
cufflinks 16.3842 0.0 36.5945   High
cufflinks 11.5961 0.0 26.3845    

0 Strain