Gene : Eucgr.D00301 E. grandis v2.0
Defline:  (1 of 3) PTHR11759:SF12 - 40S RIBOSOMAL PROTEIN S14-1-RELATED Genomic Order:  233
Name:  ? Eucgr.D00301 Secondary Identifier:  ? PAC:32051878
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D00301 0.5kb upstream 0.5kb upstream 3761 true Chr04: 5271144-5274904 Eucalyptus grandis
Eucgr.D00301 0.5kb upstream 0.5kb upstream 500 false Chr04: 5271144-5271643 Eucalyptus grandis
Eucgr.D00301 0.5kb downstream 0.5kb downstream 3761 true Chr04: 5271644-5275404 Eucalyptus grandis
Eucgr.D00301 0.5kb downstream 0.5kb downstream 500 false Chr04: 5274905-5275404 Eucalyptus grandis
Eucgr.D00301 1.0kb upstream 1.0kb upstream 4261 true Chr04: 5270644-5274904 Eucalyptus grandis
Eucgr.D00301 1.0kb upstream 1.0kb upstream 1000 false Chr04: 5270644-5271643 Eucalyptus grandis
Eucgr.D00301 1.0kb downstream 1.0kb downstream 4261 true Chr04: 5271644-5275904 Eucalyptus grandis
Eucgr.D00301 1.0kb downstream 1.0kb downstream 1000 false Chr04: 5274905-5275904 Eucalyptus grandis
Eucgr.D00301 2.0kb upstream 2.0kb upstream 5261 true Chr04: 5269644-5274904 Eucalyptus grandis
Eucgr.D00301 2.0kb upstream 2.0kb upstream 2000 false Chr04: 5269644-5271643 Eucalyptus grandis
Eucgr.D00301 2.0kb downstream 2.0kb downstream 5261 true Chr04: 5271644-5276904 Eucalyptus grandis
Eucgr.D00301 2.0kb downstream 2.0kb downstream 2000 false Chr04: 5274905-5276904 Eucalyptus grandis
Eucgr.D00301 5.0kb upstream 5.0kb upstream 8261 true Chr04: 5266644-5274904 Eucalyptus grandis
Eucgr.D00301 5.0kb upstream 5.0kb upstream 5000 false Chr04: 5266644-5271643 Eucalyptus grandis
Eucgr.D00301 5.0kb downstream 5.0kb downstream 8261 true Chr04: 5271644-5279904 Eucalyptus grandis
Eucgr.D00301 5.0kb downstream 5.0kb downstream 5000 false Chr04: 5274905-5279904 Eucalyptus grandis
Eucgr.D00301 10.0kb upstream 10.0kb upstream 13261 true Chr04: 5261644-5274904 Eucalyptus grandis
Eucgr.D00301 10.0kb upstream 10.0kb upstream 10000 false Chr04: 5261644-5271643 Eucalyptus grandis
Eucgr.D00301 10.0kb downstream 10.0kb downstream 13261 true Chr04: 5271644-5284904 Eucalyptus grandis
Eucgr.D00301 10.0kb downstream 10.0kb downstream 10000 false Chr04: 5274905-5284904 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067342 5270 Rosid View MSA
123748294 5271 Pentapetalae View MSA
122796164 5272 Eudicot View MSA
122046051 5273 Angiosperm View MSA
121350914 5274 Embryophyte View MSA
123426853 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 102.011 0.0 233.041 High  
cufflinks 83.9638 0.0 189.687 High  
cufflinks 64.8199 0.0 146.15 High Low
cufflinks 79.0252 0.0 208.456 High  
cufflinks 109.591 0.0 250.93 High High
cufflinks 79.3833 0.0 177.85 High  

0 Strain