Gene : Eucgr.D00305 E. grandis v2.0
Defline:  (1 of 1) PTHR11712:SF226 - 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE I, CHLOROPLASTIC Genomic Order:  237
Name:  ? Eucgr.D00305 Secondary Identifier:  ? PAC:32051847
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis FASYN-ELONG-PWY Eucalyptus grandis pathologic  
Egrandis PWY-5156 Eucalyptus grandis pathologic  
Egrandis PWY-5971 Eucalyptus grandis pathologic  
Egrandis PWY-5989 Eucalyptus grandis pathologic  
Egrandis PWY-6282 Eucalyptus grandis pathologic  
Egrandis PWY-7388 Eucalyptus grandis pathologic  
Egrandis PWY-7663 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D00305 0.5kb upstream 0.5kb upstream 6939 true Chr04: 5322023-5328961 Eucalyptus grandis
Eucgr.D00305 0.5kb upstream 0.5kb upstream 500 false Chr04: 5328462-5328961 Eucalyptus grandis
Eucgr.D00305 0.5kb downstream 0.5kb downstream 6939 true Chr04: 5321523-5328461 Eucalyptus grandis
Eucgr.D00305 0.5kb downstream 0.5kb downstream 500 false Chr04: 5321523-5322022 Eucalyptus grandis
Eucgr.D00305 1.0kb upstream 1.0kb upstream 7439 true Chr04: 5322023-5329461 Eucalyptus grandis
Eucgr.D00305 1.0kb upstream 1.0kb upstream 1000 false Chr04: 5328462-5329461 Eucalyptus grandis
Eucgr.D00305 1.0kb downstream 1.0kb downstream 7439 true Chr04: 5321023-5328461 Eucalyptus grandis
Eucgr.D00305 1.0kb downstream 1.0kb downstream 1000 false Chr04: 5321023-5322022 Eucalyptus grandis
Eucgr.D00305 2.0kb upstream 2.0kb upstream 8439 true Chr04: 5322023-5330461 Eucalyptus grandis
Eucgr.D00305 2.0kb upstream 2.0kb upstream 2000 false Chr04: 5328462-5330461 Eucalyptus grandis
Eucgr.D00305 2.0kb downstream 2.0kb downstream 8439 true Chr04: 5320023-5328461 Eucalyptus grandis
Eucgr.D00305 2.0kb downstream 2.0kb downstream 2000 false Chr04: 5320023-5322022 Eucalyptus grandis
Eucgr.D00305 5.0kb upstream 5.0kb upstream 11439 true Chr04: 5322023-5333461 Eucalyptus grandis
Eucgr.D00305 5.0kb upstream 5.0kb upstream 5000 false Chr04: 5328462-5333461 Eucalyptus grandis
Eucgr.D00305 5.0kb downstream 5.0kb downstream 11439 true Chr04: 5317023-5328461 Eucalyptus grandis
Eucgr.D00305 5.0kb downstream 5.0kb downstream 5000 false Chr04: 5317023-5322022 Eucalyptus grandis
Eucgr.D00305 10.0kb upstream 10.0kb upstream 16439 true Chr04: 5322023-5338461 Eucalyptus grandis
Eucgr.D00305 10.0kb upstream 10.0kb upstream 10000 false Chr04: 5328462-5338461 Eucalyptus grandis
Eucgr.D00305 10.0kb downstream 10.0kb downstream 16439 true Chr04: 5312023-5328461 Eucalyptus grandis
Eucgr.D00305 10.0kb downstream 10.0kb downstream 10000 false Chr04: 5312023-5322022 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064004 5270 Rosid View MSA
123747178 5271 Pentapetalae View MSA
122792015 5272 Eudicot View MSA
122044089 5273 Angiosperm View MSA
121347391 5274 Embryophyte View MSA
123426303 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 35.3373 0.0 80.6913 High High
cufflinks 16.6171 0.0 42.4507    
cufflinks 26.845 0.0 60.4811 High  
cufflinks 16.2132 0.0 36.4715    
cufflinks 8.17748 0.0 18.8355   Low
cufflinks 27.312 0.0 61.5109    

0 Strain