Gene : Eucgr.D01223 E. grandis v2.0
Defline:  (1 of 1) KOG3392 - Exon-exon junction complex, Magoh component Genomic Order:  1182
Name:  ? Eucgr.D01223 Secondary Identifier:  ? PAC:32049834
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D01223 0.5kb upstream 0.5kb upstream 4274 true Chr04: 25632530-25636803 Eucalyptus grandis
Eucgr.D01223 0.5kb upstream 0.5kb upstream 500 false Chr04: 25636304-25636803 Eucalyptus grandis
Eucgr.D01223 0.5kb downstream 0.5kb downstream 4274 true Chr04: 25632030-25636303 Eucalyptus grandis
Eucgr.D01223 0.5kb downstream 0.5kb downstream 500 false Chr04: 25632030-25632529 Eucalyptus grandis
Eucgr.D01223 1.0kb upstream 1.0kb upstream 4774 true Chr04: 25632530-25637303 Eucalyptus grandis
Eucgr.D01223 1.0kb upstream 1.0kb upstream 1000 false Chr04: 25636304-25637303 Eucalyptus grandis
Eucgr.D01223 1.0kb downstream 1.0kb downstream 4774 true Chr04: 25631530-25636303 Eucalyptus grandis
Eucgr.D01223 1.0kb downstream 1.0kb downstream 1000 false Chr04: 25631530-25632529 Eucalyptus grandis
Eucgr.D01223 2.0kb upstream 2.0kb upstream 5774 true Chr04: 25632530-25638303 Eucalyptus grandis
Eucgr.D01223 2.0kb upstream 2.0kb upstream 2000 false Chr04: 25636304-25638303 Eucalyptus grandis
Eucgr.D01223 2.0kb downstream 2.0kb downstream 5774 true Chr04: 25630530-25636303 Eucalyptus grandis
Eucgr.D01223 2.0kb downstream 2.0kb downstream 2000 false Chr04: 25630530-25632529 Eucalyptus grandis
Eucgr.D01223 5.0kb upstream 5.0kb upstream 8774 true Chr04: 25632530-25641303 Eucalyptus grandis
Eucgr.D01223 5.0kb upstream 5.0kb upstream 5000 false Chr04: 25636304-25641303 Eucalyptus grandis
Eucgr.D01223 5.0kb downstream 5.0kb downstream 8774 true Chr04: 25627530-25636303 Eucalyptus grandis
Eucgr.D01223 5.0kb downstream 5.0kb downstream 5000 false Chr04: 25627530-25632529 Eucalyptus grandis
Eucgr.D01223 10.0kb upstream 10.0kb upstream 13774 true Chr04: 25632530-25646303 Eucalyptus grandis
Eucgr.D01223 10.0kb upstream 10.0kb upstream 10000 false Chr04: 25636304-25646303 Eucalyptus grandis
Eucgr.D01223 10.0kb downstream 10.0kb downstream 13774 true Chr04: 25622530-25636303 Eucalyptus grandis
Eucgr.D01223 10.0kb downstream 10.0kb downstream 10000 false Chr04: 25622530-25632529 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066056 5270 Rosid View MSA
123753775 5271 Pentapetalae View MSA
122786984 5272 Eudicot View MSA
122044981 5273 Angiosperm View MSA
121347461 5274 Embryophyte View MSA
123426224 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 59.1088 0.0 132.826 High  
cufflinks 57.5592 0.0 128.971 High  
cufflinks 52.4295 0.0 118.569 High  
cufflinks 91.3168 0.0 210.216 High  
cufflinks 105.841 0.0 245.579 High High
cufflinks 33.2612 0.0 76.4375   Low

0 Strain