Gene : Eucgr.D01184 E. grandis v2.0
Defline:  (1 of 1) PTHR10772:SF13 - CHLOROPLAST CHAPERONIN 10 Genomic Order:  1148
Name:  ? Eucgr.D01184 Secondary Identifier:  ? PAC:32051646
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D01184 0.5kb upstream 0.5kb upstream 3494 true Chr04: 25127218-25130711 Eucalyptus grandis
Eucgr.D01184 0.5kb upstream 0.5kb upstream 500 false Chr04: 25130212-25130711 Eucalyptus grandis
Eucgr.D01184 0.5kb downstream 0.5kb downstream 3494 true Chr04: 25126718-25130211 Eucalyptus grandis
Eucgr.D01184 0.5kb downstream 0.5kb downstream 500 false Chr04: 25126718-25127217 Eucalyptus grandis
Eucgr.D01184 1.0kb upstream 1.0kb upstream 3994 true Chr04: 25127218-25131211 Eucalyptus grandis
Eucgr.D01184 1.0kb upstream 1.0kb upstream 1000 false Chr04: 25130212-25131211 Eucalyptus grandis
Eucgr.D01184 1.0kb downstream 1.0kb downstream 3994 true Chr04: 25126218-25130211 Eucalyptus grandis
Eucgr.D01184 1.0kb downstream 1.0kb downstream 1000 false Chr04: 25126218-25127217 Eucalyptus grandis
Eucgr.D01184 2.0kb upstream 2.0kb upstream 4994 true Chr04: 25127218-25132211 Eucalyptus grandis
Eucgr.D01184 2.0kb upstream 2.0kb upstream 2000 false Chr04: 25130212-25132211 Eucalyptus grandis
Eucgr.D01184 2.0kb downstream 2.0kb downstream 4994 true Chr04: 25125218-25130211 Eucalyptus grandis
Eucgr.D01184 2.0kb downstream 2.0kb downstream 2000 false Chr04: 25125218-25127217 Eucalyptus grandis
Eucgr.D01184 5.0kb upstream 5.0kb upstream 7994 true Chr04: 25127218-25135211 Eucalyptus grandis
Eucgr.D01184 5.0kb upstream 5.0kb upstream 5000 false Chr04: 25130212-25135211 Eucalyptus grandis
Eucgr.D01184 5.0kb downstream 5.0kb downstream 7994 true Chr04: 25122218-25130211 Eucalyptus grandis
Eucgr.D01184 5.0kb downstream 5.0kb downstream 5000 false Chr04: 25122218-25127217 Eucalyptus grandis
Eucgr.D01184 10.0kb upstream 10.0kb upstream 12994 true Chr04: 25127218-25140211 Eucalyptus grandis
Eucgr.D01184 10.0kb upstream 10.0kb upstream 10000 false Chr04: 25130212-25140211 Eucalyptus grandis
Eucgr.D01184 10.0kb downstream 10.0kb downstream 12994 true Chr04: 25117218-25130211 Eucalyptus grandis
Eucgr.D01184 10.0kb downstream 10.0kb downstream 10000 false Chr04: 25117218-25127217 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060577 5270 Rosid View MSA
123741920 5271 Pentapetalae View MSA
122785920 5272 Eudicot View MSA
122042502 5273 Angiosperm View MSA
121347169 5274 Embryophyte View MSA
123426072 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 174.502 0.0 462.369 High  
cufflinks 41.6896 0.0 96.5543    
cufflinks 128.352 0.0 321.81 High  
cufflinks 32.6852 0.0 78.7586   Low
cufflinks 76.5689 0.0 172.402 High  
cufflinks 271.6 0.0 623.409 High High

0 Strain