Gene : Eucgr.D01216 E. grandis v2.0
Defline:  (1 of 503) PF01535 - PPR repeat (PPR) Genomic Order:  1175
Name:  ? Eucgr.D01216 Secondary Identifier:  ? PAC:32049771
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D01216 0.5kb upstream 0.5kb upstream 4968 true Chr04: 25479255-25484222 Eucalyptus grandis
Eucgr.D01216 0.5kb upstream 0.5kb upstream 500 false Chr04: 25483723-25484222 Eucalyptus grandis
Eucgr.D01216 0.5kb downstream 0.5kb downstream 4968 true Chr04: 25478755-25483722 Eucalyptus grandis
Eucgr.D01216 0.5kb downstream 0.5kb downstream 500 false Chr04: 25478755-25479254 Eucalyptus grandis
Eucgr.D01216 1.0kb upstream 1.0kb upstream 5468 true Chr04: 25479255-25484722 Eucalyptus grandis
Eucgr.D01216 1.0kb upstream 1.0kb upstream 1000 false Chr04: 25483723-25484722 Eucalyptus grandis
Eucgr.D01216 1.0kb downstream 1.0kb downstream 5468 true Chr04: 25478255-25483722 Eucalyptus grandis
Eucgr.D01216 1.0kb downstream 1.0kb downstream 1000 false Chr04: 25478255-25479254 Eucalyptus grandis
Eucgr.D01216 2.0kb upstream 2.0kb upstream 6468 true Chr04: 25479255-25485722 Eucalyptus grandis
Eucgr.D01216 2.0kb upstream 2.0kb upstream 2000 false Chr04: 25483723-25485722 Eucalyptus grandis
Eucgr.D01216 2.0kb downstream 2.0kb downstream 6468 true Chr04: 25477255-25483722 Eucalyptus grandis
Eucgr.D01216 2.0kb downstream 2.0kb downstream 2000 false Chr04: 25477255-25479254 Eucalyptus grandis
Eucgr.D01216 5.0kb upstream 5.0kb upstream 9468 true Chr04: 25479255-25488722 Eucalyptus grandis
Eucgr.D01216 5.0kb upstream 5.0kb upstream 5000 false Chr04: 25483723-25488722 Eucalyptus grandis
Eucgr.D01216 5.0kb downstream 5.0kb downstream 9468 true Chr04: 25474255-25483722 Eucalyptus grandis
Eucgr.D01216 5.0kb downstream 5.0kb downstream 5000 false Chr04: 25474255-25479254 Eucalyptus grandis
Eucgr.D01216 10.0kb upstream 10.0kb upstream 14468 true Chr04: 25479255-25493722 Eucalyptus grandis
Eucgr.D01216 10.0kb upstream 10.0kb upstream 10000 false Chr04: 25483723-25493722 Eucalyptus grandis
Eucgr.D01216 10.0kb downstream 10.0kb downstream 14468 true Chr04: 25469255-25483722 Eucalyptus grandis
Eucgr.D01216 10.0kb downstream 10.0kb downstream 10000 false Chr04: 25469255-25479254 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062625 5270 Rosid View MSA
123739540 5271 Pentapetalae View MSA
122790225 5272 Eudicot View MSA
122049132 5273 Angiosperm View MSA
121351065 5274 Embryophyte View MSA
123381996 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.59012 0.0 6.51878    
cufflinks 1.2759 0.0 3.43177    
cufflinks 1.68023 0.0 4.40069    
cufflinks 0.837924 0.0 2.343    
cufflinks 0.360068 0.0 1.11371 Low Low
cufflinks 6.28685 0.0 14.5809   High

0 Strain