Gene : Eucgr.D01163 E. grandis v2.0
Defline:  (1 of 19) 5.4.99.39 - Beta-amyrin synthase / 2,3-oxidosqualene beta-amyrin cyclase Genomic Order:  1129
Name:  ? Eucgr.D01163 Secondary Identifier:  ? PAC:32051467
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5203 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D01163 0.5kb upstream 0.5kb upstream 6246 true Chr04: 24679690-24685935 Eucalyptus grandis
Eucgr.D01163 0.5kb upstream 0.5kb upstream 500 false Chr04: 24679690-24680189 Eucalyptus grandis
Eucgr.D01163 0.5kb downstream 0.5kb downstream 6246 true Chr04: 24680190-24686435 Eucalyptus grandis
Eucgr.D01163 0.5kb downstream 0.5kb downstream 500 false Chr04: 24685936-24686435 Eucalyptus grandis
Eucgr.D01163 1.0kb upstream 1.0kb upstream 6746 true Chr04: 24679190-24685935 Eucalyptus grandis
Eucgr.D01163 1.0kb upstream 1.0kb upstream 1000 false Chr04: 24679190-24680189 Eucalyptus grandis
Eucgr.D01163 1.0kb downstream 1.0kb downstream 6746 true Chr04: 24680190-24686935 Eucalyptus grandis
Eucgr.D01163 1.0kb downstream 1.0kb downstream 1000 false Chr04: 24685936-24686935 Eucalyptus grandis
Eucgr.D01163 2.0kb upstream 2.0kb upstream 7746 true Chr04: 24678190-24685935 Eucalyptus grandis
Eucgr.D01163 2.0kb upstream 2.0kb upstream 2000 false Chr04: 24678190-24680189 Eucalyptus grandis
Eucgr.D01163 2.0kb downstream 2.0kb downstream 7746 true Chr04: 24680190-24687935 Eucalyptus grandis
Eucgr.D01163 2.0kb downstream 2.0kb downstream 2000 false Chr04: 24685936-24687935 Eucalyptus grandis
Eucgr.D01163 5.0kb upstream 5.0kb upstream 10746 true Chr04: 24675190-24685935 Eucalyptus grandis
Eucgr.D01163 5.0kb upstream 5.0kb upstream 5000 false Chr04: 24675190-24680189 Eucalyptus grandis
Eucgr.D01163 5.0kb downstream 5.0kb downstream 10746 true Chr04: 24680190-24690935 Eucalyptus grandis
Eucgr.D01163 5.0kb downstream 5.0kb downstream 5000 false Chr04: 24685936-24690935 Eucalyptus grandis
Eucgr.D01163 10.0kb upstream 10.0kb upstream 15746 true Chr04: 24670190-24685935 Eucalyptus grandis
Eucgr.D01163 10.0kb upstream 10.0kb upstream 10000 false Chr04: 24670190-24680189 Eucalyptus grandis
Eucgr.D01163 10.0kb downstream 10.0kb downstream 15746 true Chr04: 24680190-24695935 Eucalyptus grandis
Eucgr.D01163 10.0kb downstream 10.0kb downstream 10000 false Chr04: 24685936-24695935 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791741 5273 Angiosperm View MSA
124062069 5270 Rosid View MSA
123738080 5271 Pentapetalae View MSA
122788516 5272 Eudicot View MSA
121063041 5274 Embryophyte View MSA
123102827 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.51258 0.0 6.19479    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.64287 0.0 8.65296    
cufflinks 0.722723 0.0 2.01882 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain