Gene : Eucgr.D01080 E. grandis v2.0
Defline:  (1 of 1) PTHR15495//PTHR15495:SF17 - NEGATIVE REGULATOR OF VESICLE FORMATION-RELATED Genomic Order:  1065
Name:  ? Eucgr.D01080 Secondary Identifier:  ? PAC:32051656
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D01080 0.5kb upstream 0.5kb upstream 4551 true Chr04: 23041509-23046059 Eucalyptus grandis
Eucgr.D01080 0.5kb upstream 0.5kb upstream 500 false Chr04: 23041509-23042008 Eucalyptus grandis
Eucgr.D01080 0.5kb downstream 0.5kb downstream 4551 true Chr04: 23042009-23046559 Eucalyptus grandis
Eucgr.D01080 0.5kb downstream 0.5kb downstream 500 false Chr04: 23046060-23046559 Eucalyptus grandis
Eucgr.D01080 1.0kb upstream 1.0kb upstream 5051 true Chr04: 23041009-23046059 Eucalyptus grandis
Eucgr.D01080 1.0kb upstream 1.0kb upstream 1000 false Chr04: 23041009-23042008 Eucalyptus grandis
Eucgr.D01080 1.0kb downstream 1.0kb downstream 5051 true Chr04: 23042009-23047059 Eucalyptus grandis
Eucgr.D01080 1.0kb downstream 1.0kb downstream 1000 false Chr04: 23046060-23047059 Eucalyptus grandis
Eucgr.D01080 2.0kb upstream 2.0kb upstream 6051 true Chr04: 23040009-23046059 Eucalyptus grandis
Eucgr.D01080 2.0kb upstream 2.0kb upstream 2000 false Chr04: 23040009-23042008 Eucalyptus grandis
Eucgr.D01080 2.0kb downstream 2.0kb downstream 6051 true Chr04: 23042009-23048059 Eucalyptus grandis
Eucgr.D01080 2.0kb downstream 2.0kb downstream 2000 false Chr04: 23046060-23048059 Eucalyptus grandis
Eucgr.D01080 5.0kb upstream 5.0kb upstream 9051 true Chr04: 23037009-23046059 Eucalyptus grandis
Eucgr.D01080 5.0kb upstream 5.0kb upstream 5000 false Chr04: 23037009-23042008 Eucalyptus grandis
Eucgr.D01080 5.0kb downstream 5.0kb downstream 9051 true Chr04: 23042009-23051059 Eucalyptus grandis
Eucgr.D01080 5.0kb downstream 5.0kb downstream 5000 false Chr04: 23046060-23051059 Eucalyptus grandis
Eucgr.D01080 10.0kb upstream 10.0kb upstream 14051 true Chr04: 23032009-23046059 Eucalyptus grandis
Eucgr.D01080 10.0kb upstream 10.0kb upstream 10000 false Chr04: 23032009-23042008 Eucalyptus grandis
Eucgr.D01080 10.0kb downstream 10.0kb downstream 14051 true Chr04: 23042009-23056059 Eucalyptus grandis
Eucgr.D01080 10.0kb downstream 10.0kb downstream 10000 false Chr04: 23046060-23056059 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065569 5270 Rosid View MSA
123747210 5271 Pentapetalae View MSA
122789939 5272 Eudicot View MSA
122045656 5273 Angiosperm View MSA
121347339 5274 Embryophyte View MSA
123426841 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.03895 0.0 8.0032    
cufflinks 1.45738 0.0 4.12751    
cufflinks 3.07994 0.0 8.10559    
cufflinks 1.92828 0.0 5.30116    
cufflinks 0.983013 0.0 2.89992   Low
cufflinks 5.36123 0.0 13.3248   High

0 Strain