Gene : Eucgr.D01020 E. grandis v2.0
Defline:  (1 of 2) PTHR22874:SF4 - TRANSDUCIN/WD-40 REPEAT-CONTAINING PROTEIN-RELATED Genomic Order:  1012
Name:  ? Eucgr.D01020 Secondary Identifier:  ? PAC:32051913
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D01020 0.5kb upstream 0.5kb upstream 11750 true Chr04: 21904290-21916039 Eucalyptus grandis
Eucgr.D01020 0.5kb upstream 0.5kb upstream 500 false Chr04: 21915540-21916039 Eucalyptus grandis
Eucgr.D01020 0.5kb downstream 0.5kb downstream 11750 true Chr04: 21903790-21915539 Eucalyptus grandis
Eucgr.D01020 0.5kb downstream 0.5kb downstream 500 false Chr04: 21903790-21904289 Eucalyptus grandis
Eucgr.D01020 1.0kb upstream 1.0kb upstream 12250 true Chr04: 21904290-21916539 Eucalyptus grandis
Eucgr.D01020 1.0kb upstream 1.0kb upstream 1000 false Chr04: 21915540-21916539 Eucalyptus grandis
Eucgr.D01020 1.0kb downstream 1.0kb downstream 12250 true Chr04: 21903290-21915539 Eucalyptus grandis
Eucgr.D01020 1.0kb downstream 1.0kb downstream 1000 false Chr04: 21903290-21904289 Eucalyptus grandis
Eucgr.D01020 2.0kb upstream 2.0kb upstream 13250 true Chr04: 21904290-21917539 Eucalyptus grandis
Eucgr.D01020 2.0kb upstream 2.0kb upstream 2000 false Chr04: 21915540-21917539 Eucalyptus grandis
Eucgr.D01020 2.0kb downstream 2.0kb downstream 13250 true Chr04: 21902290-21915539 Eucalyptus grandis
Eucgr.D01020 2.0kb downstream 2.0kb downstream 2000 false Chr04: 21902290-21904289 Eucalyptus grandis
Eucgr.D01020 5.0kb upstream 5.0kb upstream 16250 true Chr04: 21904290-21920539 Eucalyptus grandis
Eucgr.D01020 5.0kb upstream 5.0kb upstream 5000 false Chr04: 21915540-21920539 Eucalyptus grandis
Eucgr.D01020 5.0kb downstream 5.0kb downstream 16250 true Chr04: 21899290-21915539 Eucalyptus grandis
Eucgr.D01020 5.0kb downstream 5.0kb downstream 5000 false Chr04: 21899290-21904289 Eucalyptus grandis
Eucgr.D01020 10.0kb upstream 10.0kb upstream 21250 true Chr04: 21904290-21925539 Eucalyptus grandis
Eucgr.D01020 10.0kb upstream 10.0kb upstream 10000 false Chr04: 21915540-21925539 Eucalyptus grandis
Eucgr.D01020 10.0kb downstream 10.0kb downstream 21250 true Chr04: 21894290-21915539 Eucalyptus grandis
Eucgr.D01020 10.0kb downstream 10.0kb downstream 10000 false Chr04: 21894290-21904289 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072284 5270 Rosid View MSA
123744540 5271 Pentapetalae View MSA
122788668 5272 Eudicot View MSA
122045725 5273 Angiosperm View MSA
121344183 5274 Embryophyte View MSA
123426396 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.0765 0.0 64.88 High  
cufflinks 25.944 0.0 57.7846    
cufflinks 31.0561 0.0 69.5144 High  
cufflinks 44.0208 0.0 100.563 High High
cufflinks 33.3693 0.0 74.9529    
cufflinks 23.2674 0.0 51.5837   Low

0 Strain