Gene : Eucgr.D00972 E. grandis v2.0
Defline:  (1 of 2) PTHR31314:SF5 - MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN-RELATED Genomic Order:  974
Name:  ? Eucgr.D00972 Secondary Identifier:  ? PAC:32051754
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D00972 0.5kb upstream 0.5kb upstream 5631 true Chr04: 21131622-21137252 Eucalyptus grandis
Eucgr.D00972 0.5kb upstream 0.5kb upstream 500 false Chr04: 21131622-21132121 Eucalyptus grandis
Eucgr.D00972 0.5kb downstream 0.5kb downstream 5631 true Chr04: 21132122-21137752 Eucalyptus grandis
Eucgr.D00972 0.5kb downstream 0.5kb downstream 500 false Chr04: 21137253-21137752 Eucalyptus grandis
Eucgr.D00972 1.0kb upstream 1.0kb upstream 6131 true Chr04: 21131122-21137252 Eucalyptus grandis
Eucgr.D00972 1.0kb upstream 1.0kb upstream 1000 false Chr04: 21131122-21132121 Eucalyptus grandis
Eucgr.D00972 1.0kb downstream 1.0kb downstream 6131 true Chr04: 21132122-21138252 Eucalyptus grandis
Eucgr.D00972 1.0kb downstream 1.0kb downstream 1000 false Chr04: 21137253-21138252 Eucalyptus grandis
Eucgr.D00972 2.0kb upstream 2.0kb upstream 7131 true Chr04: 21130122-21137252 Eucalyptus grandis
Eucgr.D00972 2.0kb upstream 2.0kb upstream 2000 false Chr04: 21130122-21132121 Eucalyptus grandis
Eucgr.D00972 2.0kb downstream 2.0kb downstream 7131 true Chr04: 21132122-21139252 Eucalyptus grandis
Eucgr.D00972 2.0kb downstream 2.0kb downstream 2000 false Chr04: 21137253-21139252 Eucalyptus grandis
Eucgr.D00972 5.0kb upstream 5.0kb upstream 10131 true Chr04: 21127122-21137252 Eucalyptus grandis
Eucgr.D00972 5.0kb upstream 5.0kb upstream 5000 false Chr04: 21127122-21132121 Eucalyptus grandis
Eucgr.D00972 5.0kb downstream 5.0kb downstream 10131 true Chr04: 21132122-21142252 Eucalyptus grandis
Eucgr.D00972 5.0kb downstream 5.0kb downstream 5000 false Chr04: 21137253-21142252 Eucalyptus grandis
Eucgr.D00972 10.0kb upstream 10.0kb upstream 15131 true Chr04: 21122122-21137252 Eucalyptus grandis
Eucgr.D00972 10.0kb upstream 10.0kb upstream 10000 false Chr04: 21122122-21132121 Eucalyptus grandis
Eucgr.D00972 10.0kb downstream 10.0kb downstream 15131 true Chr04: 21132122-21147252 Eucalyptus grandis
Eucgr.D00972 10.0kb downstream 10.0kb downstream 10000 false Chr04: 21137253-21147252 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060454 5270 Rosid View MSA
123742883 5271 Pentapetalae View MSA
122794375 5272 Eudicot View MSA
122045611 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121349882 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.8189 0.0 86.3844 High  
cufflinks 19.7909 0.0 44.764    
cufflinks 26.8224 0.0 79.4639 High  
cufflinks 18.8187 0.0 53.6838    
cufflinks 30.3937 0.0 88.6417    
cufflinks 66.5032 0.0 175.392 High High

0 Strain