Gene : Eucgr.D01012 E. grandis v2.0
Defline:  (1 of 1) PTHR12873//PTHR12873:SF2 - T7-LIKE MITOCHONDRIAL DNA HELICASE Genomic Order:  1005
Name:  ? Eucgr.D01012 Secondary Identifier:  ? PAC:32051774
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D01012 0.5kb upstream 0.5kb upstream 9902 true Chr04: 21749110-21759011 Eucalyptus grandis
Eucgr.D01012 0.5kb upstream 0.5kb upstream 500 false Chr04: 21749110-21749609 Eucalyptus grandis
Eucgr.D01012 0.5kb downstream 0.5kb downstream 9902 true Chr04: 21749610-21759511 Eucalyptus grandis
Eucgr.D01012 0.5kb downstream 0.5kb downstream 500 false Chr04: 21759012-21759511 Eucalyptus grandis
Eucgr.D01012 1.0kb upstream 1.0kb upstream 10402 true Chr04: 21748610-21759011 Eucalyptus grandis
Eucgr.D01012 1.0kb upstream 1.0kb upstream 1000 false Chr04: 21748610-21749609 Eucalyptus grandis
Eucgr.D01012 1.0kb downstream 1.0kb downstream 10402 true Chr04: 21749610-21760011 Eucalyptus grandis
Eucgr.D01012 1.0kb downstream 1.0kb downstream 1000 false Chr04: 21759012-21760011 Eucalyptus grandis
Eucgr.D01012 2.0kb upstream 2.0kb upstream 11402 true Chr04: 21747610-21759011 Eucalyptus grandis
Eucgr.D01012 2.0kb upstream 2.0kb upstream 2000 false Chr04: 21747610-21749609 Eucalyptus grandis
Eucgr.D01012 2.0kb downstream 2.0kb downstream 11402 true Chr04: 21749610-21761011 Eucalyptus grandis
Eucgr.D01012 2.0kb downstream 2.0kb downstream 2000 false Chr04: 21759012-21761011 Eucalyptus grandis
Eucgr.D01012 5.0kb upstream 5.0kb upstream 14402 true Chr04: 21744610-21759011 Eucalyptus grandis
Eucgr.D01012 5.0kb upstream 5.0kb upstream 5000 false Chr04: 21744610-21749609 Eucalyptus grandis
Eucgr.D01012 5.0kb downstream 5.0kb downstream 14402 true Chr04: 21749610-21764011 Eucalyptus grandis
Eucgr.D01012 5.0kb downstream 5.0kb downstream 5000 false Chr04: 21759012-21764011 Eucalyptus grandis
Eucgr.D01012 10.0kb upstream 10.0kb upstream 19402 true Chr04: 21739610-21759011 Eucalyptus grandis
Eucgr.D01012 10.0kb upstream 10.0kb upstream 10000 false Chr04: 21739610-21749609 Eucalyptus grandis
Eucgr.D01012 10.0kb downstream 10.0kb downstream 19402 true Chr04: 21749610-21769011 Eucalyptus grandis
Eucgr.D01012 10.0kb downstream 10.0kb downstream 10000 false Chr04: 21759012-21769011 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779308 5273 Angiosperm View MSA
124073387 5270 Rosid View MSA
123742037 5271 Pentapetalae View MSA
122770181 5272 Eudicot View MSA
121050980 5274 Embryophyte View MSA
123091087 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.31032 0.0 13.195    
cufflinks 1.36773 0.0 3.8736   Low
cufflinks 4.29159 0.0 10.8595    
cufflinks 2.21812 0.0 5.97356    
cufflinks 7.81553 0.0 18.6798   High
cufflinks 2.51821 0.0 6.76787    

0 Strain