Gene : Eucgr.D00883 E. grandis v2.0
Defline:  (1 of 1) PTHR23315:SF112 - U-BOX DOMAIN-CONTAINING PROTEIN 8 Genomic Order:  668
Name:  ? Eucgr.D00883 Secondary Identifier:  ? PAC:32050420
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-7511 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D00883 0.5kb upstream 0.5kb upstream 1744 true Chr04: 15030055-15031798 Eucalyptus grandis
Eucgr.D00883 0.5kb upstream 0.5kb upstream 500 false Chr04: 15030055-15030554 Eucalyptus grandis
Eucgr.D00883 0.5kb downstream 0.5kb downstream 1744 true Chr04: 15030555-15032298 Eucalyptus grandis
Eucgr.D00883 0.5kb downstream 0.5kb downstream 500 false Chr04: 15031799-15032298 Eucalyptus grandis
Eucgr.D00883 1.0kb upstream 1.0kb upstream 2244 true Chr04: 15029555-15031798 Eucalyptus grandis
Eucgr.D00883 1.0kb upstream 1.0kb upstream 1000 false Chr04: 15029555-15030554 Eucalyptus grandis
Eucgr.D00883 1.0kb downstream 1.0kb downstream 2244 true Chr04: 15030555-15032798 Eucalyptus grandis
Eucgr.D00883 1.0kb downstream 1.0kb downstream 1000 false Chr04: 15031799-15032798 Eucalyptus grandis
Eucgr.D00883 2.0kb upstream 2.0kb upstream 3244 true Chr04: 15028555-15031798 Eucalyptus grandis
Eucgr.D00883 2.0kb upstream 2.0kb upstream 2000 false Chr04: 15028555-15030554 Eucalyptus grandis
Eucgr.D00883 2.0kb downstream 2.0kb downstream 3244 true Chr04: 15030555-15033798 Eucalyptus grandis
Eucgr.D00883 2.0kb downstream 2.0kb downstream 2000 false Chr04: 15031799-15033798 Eucalyptus grandis
Eucgr.D00883 5.0kb upstream 5.0kb upstream 6244 true Chr04: 15025555-15031798 Eucalyptus grandis
Eucgr.D00883 5.0kb upstream 5.0kb upstream 5000 false Chr04: 15025555-15030554 Eucalyptus grandis
Eucgr.D00883 5.0kb downstream 5.0kb downstream 6244 true Chr04: 15030555-15036798 Eucalyptus grandis
Eucgr.D00883 5.0kb downstream 5.0kb downstream 5000 false Chr04: 15031799-15036798 Eucalyptus grandis
Eucgr.D00883 10.0kb upstream 10.0kb upstream 11244 true Chr04: 15020555-15031798 Eucalyptus grandis
Eucgr.D00883 10.0kb upstream 10.0kb upstream 10000 false Chr04: 15020555-15030554 Eucalyptus grandis
Eucgr.D00883 10.0kb downstream 10.0kb downstream 11244 true Chr04: 15030555-15041798 Eucalyptus grandis
Eucgr.D00883 10.0kb downstream 10.0kb downstream 10000 false Chr04: 15031799-15041798 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067004 5270 Rosid View MSA
123739822 5271 Pentapetalae View MSA
122791659 5272 Eudicot View MSA
122041968 5273 Angiosperm View MSA
121350406 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.7209 0.0 45.1991   High
cufflinks 13.314 0.0 31.724    
cufflinks 21.0 0.0 48.3706   High
cufflinks 10.8095 0.0 26.5094   Low
cufflinks 12.9587 0.0 30.9724    
cufflinks 11.4799 0.0 27.3331    

0 Strain