Gene : Eucgr.D00854 E. grandis v2.0
Defline:  (1 of 1) PTHR33399:SF3 - OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC-RELATED Genomic Order:  694
Name:  ? Eucgr.D00854 Secondary Identifier:  ? PAC:32050180
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D00854 0.5kb upstream 0.5kb upstream 2779 true Chr04: 15387201-15389979 Eucalyptus grandis
Eucgr.D00854 0.5kb upstream 0.5kb upstream 500 false Chr04: 15389480-15389979 Eucalyptus grandis
Eucgr.D00854 0.5kb downstream 0.5kb downstream 2779 true Chr04: 15386701-15389479 Eucalyptus grandis
Eucgr.D00854 0.5kb downstream 0.5kb downstream 500 false Chr04: 15386701-15387200 Eucalyptus grandis
Eucgr.D00854 1.0kb upstream 1.0kb upstream 3279 true Chr04: 15387201-15390479 Eucalyptus grandis
Eucgr.D00854 1.0kb upstream 1.0kb upstream 1000 false Chr04: 15389480-15390479 Eucalyptus grandis
Eucgr.D00854 1.0kb downstream 1.0kb downstream 3279 true Chr04: 15386201-15389479 Eucalyptus grandis
Eucgr.D00854 1.0kb downstream 1.0kb downstream 1000 false Chr04: 15386201-15387200 Eucalyptus grandis
Eucgr.D00854 2.0kb upstream 2.0kb upstream 4279 true Chr04: 15387201-15391479 Eucalyptus grandis
Eucgr.D00854 2.0kb upstream 2.0kb upstream 2000 false Chr04: 15389480-15391479 Eucalyptus grandis
Eucgr.D00854 2.0kb downstream 2.0kb downstream 4279 true Chr04: 15385201-15389479 Eucalyptus grandis
Eucgr.D00854 2.0kb downstream 2.0kb downstream 2000 false Chr04: 15385201-15387200 Eucalyptus grandis
Eucgr.D00854 5.0kb upstream 5.0kb upstream 7279 true Chr04: 15387201-15394479 Eucalyptus grandis
Eucgr.D00854 5.0kb upstream 5.0kb upstream 5000 false Chr04: 15389480-15394479 Eucalyptus grandis
Eucgr.D00854 5.0kb downstream 5.0kb downstream 7279 true Chr04: 15382201-15389479 Eucalyptus grandis
Eucgr.D00854 5.0kb downstream 5.0kb downstream 5000 false Chr04: 15382201-15387200 Eucalyptus grandis
Eucgr.D00854 10.0kb upstream 10.0kb upstream 12279 true Chr04: 15387201-15399479 Eucalyptus grandis
Eucgr.D00854 10.0kb upstream 10.0kb upstream 10000 false Chr04: 15389480-15399479 Eucalyptus grandis
Eucgr.D00854 10.0kb downstream 10.0kb downstream 12279 true Chr04: 15377201-15389479 Eucalyptus grandis
Eucgr.D00854 10.0kb downstream 10.0kb downstream 10000 false Chr04: 15377201-15387200 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068035 5270 Rosid View MSA
123737093 5271 Pentapetalae View MSA
122790173 5272 Eudicot View MSA
122043772 5273 Angiosperm View MSA
121344186 5274 Embryophyte View MSA
123427004 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 81.2319 0.0 182.341 High  
cufflinks 22.5139 0.0 50.2799    
cufflinks 33.1486 0.0 73.4227 High  
cufflinks 4.10943 0.0 10.5972   Low
cufflinks 2.87977 0.0 7.67612   Low
cufflinks 325.302 0.0 819.574 High High

0 Strain