Gene : Eucgr.D00856 E. grandis v2.0
Defline:  (1 of 1) 4.4.1.19 - Phosphosulfolactate synthase / PSL synthase Genomic Order:  693
Name:  ? Eucgr.D00856 Secondary Identifier:  ? PAC:32051735
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D00856 0.5kb upstream 0.5kb upstream 3929 true Chr04: 15371820-15375748 Eucalyptus grandis
Eucgr.D00856 0.5kb upstream 0.5kb upstream 500 false Chr04: 15375249-15375748 Eucalyptus grandis
Eucgr.D00856 0.5kb downstream 0.5kb downstream 3929 true Chr04: 15371320-15375248 Eucalyptus grandis
Eucgr.D00856 0.5kb downstream 0.5kb downstream 500 false Chr04: 15371320-15371819 Eucalyptus grandis
Eucgr.D00856 1.0kb upstream 1.0kb upstream 4429 true Chr04: 15371820-15376248 Eucalyptus grandis
Eucgr.D00856 1.0kb upstream 1.0kb upstream 1000 false Chr04: 15375249-15376248 Eucalyptus grandis
Eucgr.D00856 1.0kb downstream 1.0kb downstream 4429 true Chr04: 15370820-15375248 Eucalyptus grandis
Eucgr.D00856 1.0kb downstream 1.0kb downstream 1000 false Chr04: 15370820-15371819 Eucalyptus grandis
Eucgr.D00856 2.0kb upstream 2.0kb upstream 5429 true Chr04: 15371820-15377248 Eucalyptus grandis
Eucgr.D00856 2.0kb upstream 2.0kb upstream 2000 false Chr04: 15375249-15377248 Eucalyptus grandis
Eucgr.D00856 2.0kb downstream 2.0kb downstream 5429 true Chr04: 15369820-15375248 Eucalyptus grandis
Eucgr.D00856 2.0kb downstream 2.0kb downstream 2000 false Chr04: 15369820-15371819 Eucalyptus grandis
Eucgr.D00856 5.0kb upstream 5.0kb upstream 8429 true Chr04: 15371820-15380248 Eucalyptus grandis
Eucgr.D00856 5.0kb upstream 5.0kb upstream 5000 false Chr04: 15375249-15380248 Eucalyptus grandis
Eucgr.D00856 5.0kb downstream 5.0kb downstream 8429 true Chr04: 15366820-15375248 Eucalyptus grandis
Eucgr.D00856 5.0kb downstream 5.0kb downstream 5000 false Chr04: 15366820-15371819 Eucalyptus grandis
Eucgr.D00856 10.0kb upstream 10.0kb upstream 13429 true Chr04: 15371820-15385248 Eucalyptus grandis
Eucgr.D00856 10.0kb upstream 10.0kb upstream 10000 false Chr04: 15375249-15385248 Eucalyptus grandis
Eucgr.D00856 10.0kb downstream 10.0kb downstream 13429 true Chr04: 15361820-15375248 Eucalyptus grandis
Eucgr.D00856 10.0kb downstream 10.0kb downstream 10000 false Chr04: 15361820-15371819 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062504 5270 Rosid View MSA
123738734 5271 Pentapetalae View MSA
122789350 5272 Eudicot View MSA
122046426 5273 Angiosperm View MSA
121347124 5274 Embryophyte View MSA
123380496 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.5345 0.0 74.1739 High  
cufflinks 139.162 0.0 331.991 High  
cufflinks 39.3599 0.0 87.2417 High  
cufflinks 133.563 0.0 318.143 High  
cufflinks 174.193 0.0 423.686 High High
cufflinks 24.2904 0.0 53.8461   Low

0 Strain