Gene : Eucgr.D01840 E. grandis v2.0
Defline:  (1 of 1) 6.3.2.37 - UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--D-lysine ligase / UDP-MurNAc-L-Ala-D-Glu:D-Lys ligase Genomic Order:  1503
Name:  ? Eucgr.D01840 Secondary Identifier:  ? PAC:32051882
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D01840 0.5kb upstream 0.5kb upstream 4749 true Chr04: 31930041-31934789 Eucalyptus grandis
Eucgr.D01840 0.5kb upstream 0.5kb upstream 500 false Chr04: 31934290-31934789 Eucalyptus grandis
Eucgr.D01840 0.5kb downstream 0.5kb downstream 4749 true Chr04: 31929541-31934289 Eucalyptus grandis
Eucgr.D01840 0.5kb downstream 0.5kb downstream 500 false Chr04: 31929541-31930040 Eucalyptus grandis
Eucgr.D01840 1.0kb upstream 1.0kb upstream 5249 true Chr04: 31930041-31935289 Eucalyptus grandis
Eucgr.D01840 1.0kb upstream 1.0kb upstream 1000 false Chr04: 31934290-31935289 Eucalyptus grandis
Eucgr.D01840 1.0kb downstream 1.0kb downstream 5249 true Chr04: 31929041-31934289 Eucalyptus grandis
Eucgr.D01840 1.0kb downstream 1.0kb downstream 1000 false Chr04: 31929041-31930040 Eucalyptus grandis
Eucgr.D01840 2.0kb upstream 2.0kb upstream 6249 true Chr04: 31930041-31936289 Eucalyptus grandis
Eucgr.D01840 2.0kb upstream 2.0kb upstream 2000 false Chr04: 31934290-31936289 Eucalyptus grandis
Eucgr.D01840 2.0kb downstream 2.0kb downstream 6249 true Chr04: 31928041-31934289 Eucalyptus grandis
Eucgr.D01840 2.0kb downstream 2.0kb downstream 2000 false Chr04: 31928041-31930040 Eucalyptus grandis
Eucgr.D01840 5.0kb upstream 5.0kb upstream 9249 true Chr04: 31930041-31939289 Eucalyptus grandis
Eucgr.D01840 5.0kb upstream 5.0kb upstream 5000 false Chr04: 31934290-31939289 Eucalyptus grandis
Eucgr.D01840 5.0kb downstream 5.0kb downstream 9249 true Chr04: 31925041-31934289 Eucalyptus grandis
Eucgr.D01840 5.0kb downstream 5.0kb downstream 5000 false Chr04: 31925041-31930040 Eucalyptus grandis
Eucgr.D01840 10.0kb upstream 10.0kb upstream 14249 true Chr04: 31930041-31944289 Eucalyptus grandis
Eucgr.D01840 10.0kb upstream 10.0kb upstream 10000 false Chr04: 31934290-31944289 Eucalyptus grandis
Eucgr.D01840 10.0kb downstream 10.0kb downstream 14249 true Chr04: 31920041-31934289 Eucalyptus grandis
Eucgr.D01840 10.0kb downstream 10.0kb downstream 10000 false Chr04: 31920041-31930040 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060443 5270 Rosid View MSA
123746707 5271 Pentapetalae View MSA
122792589 5272 Eudicot View MSA
122042880 5273 Angiosperm View MSA
121344951 5274 Embryophyte View MSA
123428207 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.13391 0.0 11.6852    
cufflinks 2.28908 0.0 5.5572    
cufflinks 3.69989 0.0 8.59816    
cufflinks 1.85409 0.0 4.57002   Low
cufflinks 4.36623 0.0 10.0366    
cufflinks 9.3022 0.0 20.6495   High

0 Strain