Gene : Eucgr.D01830 E. grandis v2.0
Defline:  (1 of 2) PTHR13286//PTHR13286:SF8 - SAP30 Genomic Order:  1494
Name:  ? Eucgr.D01830 Secondary Identifier:  ? PAC:32052016
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D01830 0.5kb upstream 0.5kb upstream 2700 true Chr04: 31816282-31818981 Eucalyptus grandis
Eucgr.D01830 0.5kb upstream 0.5kb upstream 500 false Chr04: 31816282-31816781 Eucalyptus grandis
Eucgr.D01830 0.5kb downstream 0.5kb downstream 2700 true Chr04: 31816782-31819481 Eucalyptus grandis
Eucgr.D01830 0.5kb downstream 0.5kb downstream 500 false Chr04: 31818982-31819481 Eucalyptus grandis
Eucgr.D01830 1.0kb upstream 1.0kb upstream 3200 true Chr04: 31815782-31818981 Eucalyptus grandis
Eucgr.D01830 1.0kb upstream 1.0kb upstream 1000 false Chr04: 31815782-31816781 Eucalyptus grandis
Eucgr.D01830 1.0kb downstream 1.0kb downstream 3200 true Chr04: 31816782-31819981 Eucalyptus grandis
Eucgr.D01830 1.0kb downstream 1.0kb downstream 1000 false Chr04: 31818982-31819981 Eucalyptus grandis
Eucgr.D01830 2.0kb upstream 2.0kb upstream 4200 true Chr04: 31814782-31818981 Eucalyptus grandis
Eucgr.D01830 2.0kb upstream 2.0kb upstream 2000 false Chr04: 31814782-31816781 Eucalyptus grandis
Eucgr.D01830 2.0kb downstream 2.0kb downstream 4200 true Chr04: 31816782-31820981 Eucalyptus grandis
Eucgr.D01830 2.0kb downstream 2.0kb downstream 2000 false Chr04: 31818982-31820981 Eucalyptus grandis
Eucgr.D01830 5.0kb upstream 5.0kb upstream 7200 true Chr04: 31811782-31818981 Eucalyptus grandis
Eucgr.D01830 5.0kb upstream 5.0kb upstream 5000 false Chr04: 31811782-31816781 Eucalyptus grandis
Eucgr.D01830 5.0kb downstream 5.0kb downstream 7200 true Chr04: 31816782-31823981 Eucalyptus grandis
Eucgr.D01830 5.0kb downstream 5.0kb downstream 5000 false Chr04: 31818982-31823981 Eucalyptus grandis
Eucgr.D01830 10.0kb upstream 10.0kb upstream 12200 true Chr04: 31806782-31818981 Eucalyptus grandis
Eucgr.D01830 10.0kb upstream 10.0kb upstream 10000 false Chr04: 31806782-31816781 Eucalyptus grandis
Eucgr.D01830 10.0kb downstream 10.0kb downstream 12200 true Chr04: 31816782-31828981 Eucalyptus grandis
Eucgr.D01830 10.0kb downstream 10.0kb downstream 10000 false Chr04: 31818982-31828981 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072143 5270 Rosid View MSA
123744780 5271 Pentapetalae View MSA
122793976 5272 Eudicot View MSA
122051007 5273 Angiosperm View MSA
121350494 5274 Embryophyte View MSA
123427737 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.6979 0.0 59.6624   High
cufflinks 6.50194 0.0 17.1806    
cufflinks 14.0453 0.0 34.5733    
cufflinks 5.59277 0.0 15.0618    
cufflinks 3.0121 0.0 8.61188   Low
cufflinks 10.8207 0.0 27.4511    

0 Strain