Gene : Eucgr.D01791 E. grandis v2.0
Defline:  (1 of 1) PTHR12608:SF6 - GDT1-LIKE PROTEIN 1, CHLOROPLASTIC Genomic Order:  1458
Name:  ? Eucgr.D01791 Secondary Identifier:  ? PAC:32049632
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D01791 0.5kb upstream 0.5kb upstream 5208 true Chr04: 31424055-31429262 Eucalyptus grandis
Eucgr.D01791 0.5kb upstream 0.5kb upstream 500 false Chr04: 31424055-31424554 Eucalyptus grandis
Eucgr.D01791 0.5kb downstream 0.5kb downstream 5208 true Chr04: 31424555-31429762 Eucalyptus grandis
Eucgr.D01791 0.5kb downstream 0.5kb downstream 500 false Chr04: 31429263-31429762 Eucalyptus grandis
Eucgr.D01791 1.0kb upstream 1.0kb upstream 5708 true Chr04: 31423555-31429262 Eucalyptus grandis
Eucgr.D01791 1.0kb upstream 1.0kb upstream 1000 false Chr04: 31423555-31424554 Eucalyptus grandis
Eucgr.D01791 1.0kb downstream 1.0kb downstream 5708 true Chr04: 31424555-31430262 Eucalyptus grandis
Eucgr.D01791 1.0kb downstream 1.0kb downstream 1000 false Chr04: 31429263-31430262 Eucalyptus grandis
Eucgr.D01791 2.0kb upstream 2.0kb upstream 6708 true Chr04: 31422555-31429262 Eucalyptus grandis
Eucgr.D01791 2.0kb upstream 2.0kb upstream 2000 false Chr04: 31422555-31424554 Eucalyptus grandis
Eucgr.D01791 2.0kb downstream 2.0kb downstream 6708 true Chr04: 31424555-31431262 Eucalyptus grandis
Eucgr.D01791 2.0kb downstream 2.0kb downstream 2000 false Chr04: 31429263-31431262 Eucalyptus grandis
Eucgr.D01791 5.0kb upstream 5.0kb upstream 9708 true Chr04: 31419555-31429262 Eucalyptus grandis
Eucgr.D01791 5.0kb upstream 5.0kb upstream 5000 false Chr04: 31419555-31424554 Eucalyptus grandis
Eucgr.D01791 5.0kb downstream 5.0kb downstream 9708 true Chr04: 31424555-31434262 Eucalyptus grandis
Eucgr.D01791 5.0kb downstream 5.0kb downstream 5000 false Chr04: 31429263-31434262 Eucalyptus grandis
Eucgr.D01791 10.0kb upstream 10.0kb upstream 14708 true Chr04: 31414555-31429262 Eucalyptus grandis
Eucgr.D01791 10.0kb upstream 10.0kb upstream 10000 false Chr04: 31414555-31424554 Eucalyptus grandis
Eucgr.D01791 10.0kb downstream 10.0kb downstream 14708 true Chr04: 31424555-31439262 Eucalyptus grandis
Eucgr.D01791 10.0kb downstream 10.0kb downstream 10000 false Chr04: 31429263-31439262 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063864 5270 Rosid View MSA
123737377 5271 Pentapetalae View MSA
122788371 5272 Eudicot View MSA
122045430 5273 Angiosperm View MSA
121344510 5274 Embryophyte View MSA
123428056 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.49115 0.0 14.1361    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.865433 0.0 2.69871   Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 14.2919 0.0 33.6859    

0 Strain