Gene : Eucgr.D01688 E. grandis v2.0
Defline:  (1 of 1) 4.1.2.53 - 2-keto-3-deoxy-L-rhamnonate aldolase / KDR aldolase Genomic Order:  1371
Name:  ? Eucgr.D01688 Secondary Identifier:  ? PAC:32050862
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D01688 0.5kb upstream 0.5kb upstream 2403 true Chr04: 30384690-30387092 Eucalyptus grandis
Eucgr.D01688 0.5kb upstream 0.5kb upstream 500 false Chr04: 30384690-30385189 Eucalyptus grandis
Eucgr.D01688 0.5kb downstream 0.5kb downstream 2403 true Chr04: 30385190-30387592 Eucalyptus grandis
Eucgr.D01688 0.5kb downstream 0.5kb downstream 500 false Chr04: 30387093-30387592 Eucalyptus grandis
Eucgr.D01688 1.0kb upstream 1.0kb upstream 2903 true Chr04: 30384190-30387092 Eucalyptus grandis
Eucgr.D01688 1.0kb upstream 1.0kb upstream 1000 false Chr04: 30384190-30385189 Eucalyptus grandis
Eucgr.D01688 1.0kb downstream 1.0kb downstream 2903 true Chr04: 30385190-30388092 Eucalyptus grandis
Eucgr.D01688 1.0kb downstream 1.0kb downstream 1000 false Chr04: 30387093-30388092 Eucalyptus grandis
Eucgr.D01688 2.0kb upstream 2.0kb upstream 3903 true Chr04: 30383190-30387092 Eucalyptus grandis
Eucgr.D01688 2.0kb upstream 2.0kb upstream 2000 false Chr04: 30383190-30385189 Eucalyptus grandis
Eucgr.D01688 2.0kb downstream 2.0kb downstream 3903 true Chr04: 30385190-30389092 Eucalyptus grandis
Eucgr.D01688 2.0kb downstream 2.0kb downstream 2000 false Chr04: 30387093-30389092 Eucalyptus grandis
Eucgr.D01688 5.0kb upstream 5.0kb upstream 6903 true Chr04: 30380190-30387092 Eucalyptus grandis
Eucgr.D01688 5.0kb upstream 5.0kb upstream 5000 false Chr04: 30380190-30385189 Eucalyptus grandis
Eucgr.D01688 5.0kb downstream 5.0kb downstream 6903 true Chr04: 30385190-30392092 Eucalyptus grandis
Eucgr.D01688 5.0kb downstream 5.0kb downstream 5000 false Chr04: 30387093-30392092 Eucalyptus grandis
Eucgr.D01688 10.0kb upstream 10.0kb upstream 11903 true Chr04: 30375190-30387092 Eucalyptus grandis
Eucgr.D01688 10.0kb upstream 10.0kb upstream 10000 false Chr04: 30375190-30385189 Eucalyptus grandis
Eucgr.D01688 10.0kb downstream 10.0kb downstream 11903 true Chr04: 30385190-30397092 Eucalyptus grandis
Eucgr.D01688 10.0kb downstream 10.0kb downstream 10000 false Chr04: 30387093-30397092 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061282 5270 Rosid View MSA
123741108 5271 Pentapetalae View MSA
122791173 5272 Eudicot View MSA
122045726 5273 Angiosperm View MSA
121345930 5274 Embryophyte View MSA
123426145 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.6311 0.0 44.4548    
cufflinks 17.1501 0.0 39.4282    
cufflinks 20.0597 0.0 45.6042    
cufflinks 6.17376 0.0 15.6304   Low
cufflinks 9.29279 0.0 22.4984    
cufflinks 16.8913 0.0 38.3539    

0 Strain