Gene : Eucgr.D01709 E. grandis v2.0
Defline:  (1 of 2) PTHR13345:SF4 - PROTEIN UXT Genomic Order:  1390
Name:  ? Eucgr.D01709 Secondary Identifier:  ? PAC:32051013
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D01709 0.5kb upstream 0.5kb upstream 3554 true Chr04: 30589541-30593094 Eucalyptus grandis
Eucgr.D01709 0.5kb upstream 0.5kb upstream 500 false Chr04: 30589541-30590040 Eucalyptus grandis
Eucgr.D01709 0.5kb downstream 0.5kb downstream 3554 true Chr04: 30590041-30593594 Eucalyptus grandis
Eucgr.D01709 0.5kb downstream 0.5kb downstream 500 false Chr04: 30593095-30593594 Eucalyptus grandis
Eucgr.D01709 1.0kb upstream 1.0kb upstream 4054 true Chr04: 30589041-30593094 Eucalyptus grandis
Eucgr.D01709 1.0kb upstream 1.0kb upstream 1000 false Chr04: 30589041-30590040 Eucalyptus grandis
Eucgr.D01709 1.0kb downstream 1.0kb downstream 4054 true Chr04: 30590041-30594094 Eucalyptus grandis
Eucgr.D01709 1.0kb downstream 1.0kb downstream 1000 false Chr04: 30593095-30594094 Eucalyptus grandis
Eucgr.D01709 2.0kb upstream 2.0kb upstream 5054 true Chr04: 30588041-30593094 Eucalyptus grandis
Eucgr.D01709 2.0kb upstream 2.0kb upstream 2000 false Chr04: 30588041-30590040 Eucalyptus grandis
Eucgr.D01709 2.0kb downstream 2.0kb downstream 5054 true Chr04: 30590041-30595094 Eucalyptus grandis
Eucgr.D01709 2.0kb downstream 2.0kb downstream 2000 false Chr04: 30593095-30595094 Eucalyptus grandis
Eucgr.D01709 5.0kb upstream 5.0kb upstream 8054 true Chr04: 30585041-30593094 Eucalyptus grandis
Eucgr.D01709 5.0kb upstream 5.0kb upstream 5000 false Chr04: 30585041-30590040 Eucalyptus grandis
Eucgr.D01709 5.0kb downstream 5.0kb downstream 8054 true Chr04: 30590041-30598094 Eucalyptus grandis
Eucgr.D01709 5.0kb downstream 5.0kb downstream 5000 false Chr04: 30593095-30598094 Eucalyptus grandis
Eucgr.D01709 10.0kb upstream 10.0kb upstream 13054 true Chr04: 30580041-30593094 Eucalyptus grandis
Eucgr.D01709 10.0kb upstream 10.0kb upstream 10000 false Chr04: 30580041-30590040 Eucalyptus grandis
Eucgr.D01709 10.0kb downstream 10.0kb downstream 13054 true Chr04: 30590041-30603094 Eucalyptus grandis
Eucgr.D01709 10.0kb downstream 10.0kb downstream 10000 false Chr04: 30593095-30603094 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065289 5270 Rosid View MSA
123736962 5271 Pentapetalae View MSA
122786813 5272 Eudicot View MSA
122042898 5273 Angiosperm View MSA
121347862 5274 Embryophyte View MSA
123425882 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.79222 0.0 17.212   Low
cufflinks 9.56908 0.0 23.1727    
cufflinks 12.108 0.0 28.8611    
cufflinks 13.3531 0.0 31.4066   High
cufflinks 9.41102 0.0 22.8946    
cufflinks 7.13682 0.0 18.1054   Low

0 Strain