Gene : Eucgr.D01670 E. grandis v2.0
Defline:  (1 of 1) PTHR14571:SF9 - PHD FINGER PROTEIN 13 Genomic Order:  1353
Name:  ? Eucgr.D01670 Secondary Identifier:  ? PAC:32051556
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D01670 0.5kb upstream 0.5kb upstream 7066 true Chr04: 30174249-30181314 Eucalyptus grandis
Eucgr.D01670 0.5kb upstream 0.5kb upstream 500 false Chr04: 30180815-30181314 Eucalyptus grandis
Eucgr.D01670 0.5kb downstream 0.5kb downstream 7066 true Chr04: 30173749-30180814 Eucalyptus grandis
Eucgr.D01670 0.5kb downstream 0.5kb downstream 500 false Chr04: 30173749-30174248 Eucalyptus grandis
Eucgr.D01670 1.0kb upstream 1.0kb upstream 7566 true Chr04: 30174249-30181814 Eucalyptus grandis
Eucgr.D01670 1.0kb upstream 1.0kb upstream 1000 false Chr04: 30180815-30181814 Eucalyptus grandis
Eucgr.D01670 1.0kb downstream 1.0kb downstream 7566 true Chr04: 30173249-30180814 Eucalyptus grandis
Eucgr.D01670 1.0kb downstream 1.0kb downstream 1000 false Chr04: 30173249-30174248 Eucalyptus grandis
Eucgr.D01670 2.0kb upstream 2.0kb upstream 8566 true Chr04: 30174249-30182814 Eucalyptus grandis
Eucgr.D01670 2.0kb upstream 2.0kb upstream 2000 false Chr04: 30180815-30182814 Eucalyptus grandis
Eucgr.D01670 2.0kb downstream 2.0kb downstream 8566 true Chr04: 30172249-30180814 Eucalyptus grandis
Eucgr.D01670 2.0kb downstream 2.0kb downstream 2000 false Chr04: 30172249-30174248 Eucalyptus grandis
Eucgr.D01670 5.0kb upstream 5.0kb upstream 11566 true Chr04: 30174249-30185814 Eucalyptus grandis
Eucgr.D01670 5.0kb upstream 5.0kb upstream 5000 false Chr04: 30180815-30185814 Eucalyptus grandis
Eucgr.D01670 5.0kb downstream 5.0kb downstream 11566 true Chr04: 30169249-30180814 Eucalyptus grandis
Eucgr.D01670 5.0kb downstream 5.0kb downstream 5000 false Chr04: 30169249-30174248 Eucalyptus grandis
Eucgr.D01670 10.0kb upstream 10.0kb upstream 16566 true Chr04: 30174249-30190814 Eucalyptus grandis
Eucgr.D01670 10.0kb upstream 10.0kb upstream 10000 false Chr04: 30180815-30190814 Eucalyptus grandis
Eucgr.D01670 10.0kb downstream 10.0kb downstream 16566 true Chr04: 30164249-30180814 Eucalyptus grandis
Eucgr.D01670 10.0kb downstream 10.0kb downstream 10000 false Chr04: 30164249-30174248 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061869 5270 Rosid View MSA
123737201 5271 Pentapetalae View MSA
122791412 5272 Eudicot View MSA
122046243 5273 Angiosperm View MSA
121350322 5274 Embryophyte View MSA
123426833 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.7643 0.0 46.6827   High
cufflinks 7.75798 0.0 17.1821    
cufflinks 17.3515 0.0 38.7823    
cufflinks 7.27554 0.0 16.1194    
cufflinks 5.74809 0.0 12.8186   Low
cufflinks 14.173 0.0 31.4382    

0 Strain