Gene : Eucgr.D01444 E. grandis v2.0
Defline:  (1 of 3) PF01426//PF05641 - BAH domain (BAH) // Agenet domain (Agenet) Genomic Order:  879
Name:  ? Eucgr.D01444 Secondary Identifier:  ? PAC:32052202
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D01444 0.5kb upstream 0.5kb upstream 7976 true Chr04: 18780717-18788692 Eucalyptus grandis
Eucgr.D01444 0.5kb upstream 0.5kb upstream 500 false Chr04: 18788193-18788692 Eucalyptus grandis
Eucgr.D01444 0.5kb downstream 0.5kb downstream 7976 true Chr04: 18780217-18788192 Eucalyptus grandis
Eucgr.D01444 0.5kb downstream 0.5kb downstream 500 false Chr04: 18780217-18780716 Eucalyptus grandis
Eucgr.D01444 1.0kb upstream 1.0kb upstream 8476 true Chr04: 18780717-18789192 Eucalyptus grandis
Eucgr.D01444 1.0kb upstream 1.0kb upstream 1000 false Chr04: 18788193-18789192 Eucalyptus grandis
Eucgr.D01444 1.0kb downstream 1.0kb downstream 8476 true Chr04: 18779717-18788192 Eucalyptus grandis
Eucgr.D01444 1.0kb downstream 1.0kb downstream 1000 false Chr04: 18779717-18780716 Eucalyptus grandis
Eucgr.D01444 2.0kb upstream 2.0kb upstream 9476 true Chr04: 18780717-18790192 Eucalyptus grandis
Eucgr.D01444 2.0kb upstream 2.0kb upstream 2000 false Chr04: 18788193-18790192 Eucalyptus grandis
Eucgr.D01444 2.0kb downstream 2.0kb downstream 9476 true Chr04: 18778717-18788192 Eucalyptus grandis
Eucgr.D01444 2.0kb downstream 2.0kb downstream 2000 false Chr04: 18778717-18780716 Eucalyptus grandis
Eucgr.D01444 5.0kb upstream 5.0kb upstream 12476 true Chr04: 18780717-18793192 Eucalyptus grandis
Eucgr.D01444 5.0kb upstream 5.0kb upstream 5000 false Chr04: 18788193-18793192 Eucalyptus grandis
Eucgr.D01444 5.0kb downstream 5.0kb downstream 12476 true Chr04: 18775717-18788192 Eucalyptus grandis
Eucgr.D01444 5.0kb downstream 5.0kb downstream 5000 false Chr04: 18775717-18780716 Eucalyptus grandis
Eucgr.D01444 10.0kb upstream 10.0kb upstream 17476 true Chr04: 18780717-18798192 Eucalyptus grandis
Eucgr.D01444 10.0kb upstream 10.0kb upstream 10000 false Chr04: 18788193-18798192 Eucalyptus grandis
Eucgr.D01444 10.0kb downstream 10.0kb downstream 17476 true Chr04: 18770717-18788192 Eucalyptus grandis
Eucgr.D01444 10.0kb downstream 10.0kb downstream 10000 false Chr04: 18770717-18780716 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124050625 5270 Rosid View MSA
123742959 5271 Pentapetalae View MSA
122786842 5272 Eudicot View MSA
122047439 5273 Angiosperm View MSA
121349027 5274 Embryophyte View MSA
123381130 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.79176 0.0 9.14091   High
cufflinks 0.936573 0.0 2.57549    
cufflinks 3.56076 0.0 8.59983   High
cufflinks 0.568337 0.0 1.64333   Low
cufflinks 0.660172 0.0 1.8875 Low  
cufflinks 2.14412 0.0 5.5046    

0 Strain