Gene : Eucgr.D01393 E. grandis v2.0
Defline:  (1 of 4) 2.7.7.41 - Phosphatidate cytidylyltransferase / CDP-diglyceride synthetase Genomic Order:  837
Name:  ? Eucgr.D01393 Secondary Identifier:  ? PAC:32051973
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY0-1319 Eucalyptus grandis pathologic  
Egrandis PWY4FS-7 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D01393 0.5kb upstream 0.5kb upstream 6570 true Chr04: 17830721-17837290 Eucalyptus grandis
Eucgr.D01393 0.5kb upstream 0.5kb upstream 500 false Chr04: 17836791-17837290 Eucalyptus grandis
Eucgr.D01393 0.5kb downstream 0.5kb downstream 6570 true Chr04: 17830221-17836790 Eucalyptus grandis
Eucgr.D01393 0.5kb downstream 0.5kb downstream 500 false Chr04: 17830221-17830720 Eucalyptus grandis
Eucgr.D01393 1.0kb upstream 1.0kb upstream 7070 true Chr04: 17830721-17837790 Eucalyptus grandis
Eucgr.D01393 1.0kb upstream 1.0kb upstream 1000 false Chr04: 17836791-17837790 Eucalyptus grandis
Eucgr.D01393 1.0kb downstream 1.0kb downstream 7070 true Chr04: 17829721-17836790 Eucalyptus grandis
Eucgr.D01393 1.0kb downstream 1.0kb downstream 1000 false Chr04: 17829721-17830720 Eucalyptus grandis
Eucgr.D01393 2.0kb upstream 2.0kb upstream 8070 true Chr04: 17830721-17838790 Eucalyptus grandis
Eucgr.D01393 2.0kb upstream 2.0kb upstream 2000 false Chr04: 17836791-17838790 Eucalyptus grandis
Eucgr.D01393 2.0kb downstream 2.0kb downstream 8070 true Chr04: 17828721-17836790 Eucalyptus grandis
Eucgr.D01393 2.0kb downstream 2.0kb downstream 2000 false Chr04: 17828721-17830720 Eucalyptus grandis
Eucgr.D01393 5.0kb upstream 5.0kb upstream 11070 true Chr04: 17830721-17841790 Eucalyptus grandis
Eucgr.D01393 5.0kb upstream 5.0kb upstream 5000 false Chr04: 17836791-17841790 Eucalyptus grandis
Eucgr.D01393 5.0kb downstream 5.0kb downstream 11070 true Chr04: 17825721-17836790 Eucalyptus grandis
Eucgr.D01393 5.0kb downstream 5.0kb downstream 5000 false Chr04: 17825721-17830720 Eucalyptus grandis
Eucgr.D01393 10.0kb upstream 10.0kb upstream 16070 true Chr04: 17830721-17846790 Eucalyptus grandis
Eucgr.D01393 10.0kb upstream 10.0kb upstream 10000 false Chr04: 17836791-17846790 Eucalyptus grandis
Eucgr.D01393 10.0kb downstream 10.0kb downstream 16070 true Chr04: 17820721-17836790 Eucalyptus grandis
Eucgr.D01393 10.0kb downstream 10.0kb downstream 10000 false Chr04: 17820721-17830720 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063669 5270 Rosid View MSA
123751234 5271 Pentapetalae View MSA
122787509 5272 Eudicot View MSA
122045670 5273 Angiosperm View MSA
121346295 5274 Embryophyte View MSA
123428107 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.185 0.0 64.3166   High
cufflinks 10.8439 0.0 27.8243    
cufflinks 22.0806 0.0 63.1231   High
cufflinks 7.06175 0.0 22.1743   Low
cufflinks 11.7753 0.0 33.3698    
cufflinks 15.5629 0.0 41.8433    

0 Strain