Gene : Eucgr.D01395 E. grandis v2.0
Defline:  (1 of 48) PF00612 - IQ calmodulin-binding motif (IQ) Genomic Order:  839
Name:  ? Eucgr.D01395 Secondary Identifier:  ? PAC:32050831
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D01395 0.5kb upstream 0.5kb upstream 902 true Chr04: 17867925-17868826 Eucalyptus grandis
Eucgr.D01395 0.5kb upstream 0.5kb upstream 500 false Chr04: 17867925-17868424 Eucalyptus grandis
Eucgr.D01395 0.5kb downstream 0.5kb downstream 902 true Chr04: 17868425-17869326 Eucalyptus grandis
Eucgr.D01395 0.5kb downstream 0.5kb downstream 500 false Chr04: 17868827-17869326 Eucalyptus grandis
Eucgr.D01395 1.0kb upstream 1.0kb upstream 1402 true Chr04: 17867425-17868826 Eucalyptus grandis
Eucgr.D01395 1.0kb upstream 1.0kb upstream 1000 false Chr04: 17867425-17868424 Eucalyptus grandis
Eucgr.D01395 1.0kb downstream 1.0kb downstream 1402 true Chr04: 17868425-17869826 Eucalyptus grandis
Eucgr.D01395 1.0kb downstream 1.0kb downstream 1000 false Chr04: 17868827-17869826 Eucalyptus grandis
Eucgr.D01395 2.0kb upstream 2.0kb upstream 2402 true Chr04: 17866425-17868826 Eucalyptus grandis
Eucgr.D01395 2.0kb upstream 2.0kb upstream 2000 false Chr04: 17866425-17868424 Eucalyptus grandis
Eucgr.D01395 2.0kb downstream 2.0kb downstream 2402 true Chr04: 17868425-17870826 Eucalyptus grandis
Eucgr.D01395 2.0kb downstream 2.0kb downstream 2000 false Chr04: 17868827-17870826 Eucalyptus grandis
Eucgr.D01395 5.0kb upstream 5.0kb upstream 5402 true Chr04: 17863425-17868826 Eucalyptus grandis
Eucgr.D01395 5.0kb upstream 5.0kb upstream 5000 false Chr04: 17863425-17868424 Eucalyptus grandis
Eucgr.D01395 5.0kb downstream 5.0kb downstream 5402 true Chr04: 17868425-17873826 Eucalyptus grandis
Eucgr.D01395 5.0kb downstream 5.0kb downstream 5000 false Chr04: 17868827-17873826 Eucalyptus grandis
Eucgr.D01395 10.0kb upstream 10.0kb upstream 10402 true Chr04: 17858425-17868826 Eucalyptus grandis
Eucgr.D01395 10.0kb upstream 10.0kb upstream 10000 false Chr04: 17858425-17868424 Eucalyptus grandis
Eucgr.D01395 10.0kb downstream 10.0kb downstream 10402 true Chr04: 17868425-17878826 Eucalyptus grandis
Eucgr.D01395 10.0kb downstream 10.0kb downstream 10000 false Chr04: 17868827-17878826 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061385 5270 Rosid View MSA
123751971 5271 Pentapetalae View MSA
122790108 5272 Eudicot View MSA
122046855 5273 Angiosperm View MSA
121348500 5274 Embryophyte View MSA
123380884 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.139217 0.0 1.17526 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.450222 0.0 2.59316    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain