Gene : Eucgr.D01324 E. grandis v2.0
Defline:  (1 of 1) PTHR12526//PTHR12526:SF341 - GLYCOSYLTRANSFERASE Genomic Order:  774
Name:  ? Eucgr.D01324 Secondary Identifier:  ? PAC:32050245
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis GLYCOGENSYNTH-PWY Eucalyptus grandis pathologic  
Egrandis PWY-622 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D01324 0.5kb upstream 0.5kb upstream 13390 true Chr04: 17031554-17044943 Eucalyptus grandis
Eucgr.D01324 0.5kb upstream 0.5kb upstream 500 false Chr04: 17031554-17032053 Eucalyptus grandis
Eucgr.D01324 0.5kb downstream 0.5kb downstream 13390 true Chr04: 17032054-17045443 Eucalyptus grandis
Eucgr.D01324 0.5kb downstream 0.5kb downstream 500 false Chr04: 17044944-17045443 Eucalyptus grandis
Eucgr.D01324 1.0kb upstream 1.0kb upstream 13890 true Chr04: 17031054-17044943 Eucalyptus grandis
Eucgr.D01324 1.0kb upstream 1.0kb upstream 1000 false Chr04: 17031054-17032053 Eucalyptus grandis
Eucgr.D01324 1.0kb downstream 1.0kb downstream 13890 true Chr04: 17032054-17045943 Eucalyptus grandis
Eucgr.D01324 1.0kb downstream 1.0kb downstream 1000 false Chr04: 17044944-17045943 Eucalyptus grandis
Eucgr.D01324 2.0kb upstream 2.0kb upstream 14890 true Chr04: 17030054-17044943 Eucalyptus grandis
Eucgr.D01324 2.0kb upstream 2.0kb upstream 2000 false Chr04: 17030054-17032053 Eucalyptus grandis
Eucgr.D01324 2.0kb downstream 2.0kb downstream 14890 true Chr04: 17032054-17046943 Eucalyptus grandis
Eucgr.D01324 2.0kb downstream 2.0kb downstream 2000 false Chr04: 17044944-17046943 Eucalyptus grandis
Eucgr.D01324 5.0kb upstream 5.0kb upstream 17890 true Chr04: 17027054-17044943 Eucalyptus grandis
Eucgr.D01324 5.0kb upstream 5.0kb upstream 5000 false Chr04: 17027054-17032053 Eucalyptus grandis
Eucgr.D01324 5.0kb downstream 5.0kb downstream 17890 true Chr04: 17032054-17049943 Eucalyptus grandis
Eucgr.D01324 5.0kb downstream 5.0kb downstream 5000 false Chr04: 17044944-17049943 Eucalyptus grandis
Eucgr.D01324 10.0kb upstream 10.0kb upstream 22890 true Chr04: 17022054-17044943 Eucalyptus grandis
Eucgr.D01324 10.0kb upstream 10.0kb upstream 10000 false Chr04: 17022054-17032053 Eucalyptus grandis
Eucgr.D01324 10.0kb downstream 10.0kb downstream 22890 true Chr04: 17032054-17054943 Eucalyptus grandis
Eucgr.D01324 10.0kb downstream 10.0kb downstream 10000 false Chr04: 17044944-17054943 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067154 5270 Rosid View MSA
123741369 5271 Pentapetalae View MSA
122793613 5272 Eudicot View MSA
122044782 5273 Angiosperm View MSA
121310340 5274 Embryophyte View MSA
123428648 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.70967 0.0 24.1085    
cufflinks 23.7676 0.0 62.6607    
cufflinks 18.6433 0.0 52.8477    
cufflinks 8.6157 0.0 25.3223   Low
cufflinks 13.4259 0.0 30.8629    
cufflinks 27.7818 0.0 63.5163   High

0 Strain