Gene : Eucgr.D01306 E. grandis v2.0
Defline:  (1 of 3) PTHR14269 - CDP-DIACYLGLYCEROL--GLYCEROL-3-PHOSPHATE 3-PHOSPHATIDYLTRANSFERASE-RELATED Genomic Order:  757
Name:  ? Eucgr.D01306 Secondary Identifier:  ? PAC:32051704
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D01306 0.5kb upstream 0.5kb upstream 4789 true Chr04: 16831207-16835995 Eucalyptus grandis
Eucgr.D01306 0.5kb upstream 0.5kb upstream 500 false Chr04: 16831207-16831706 Eucalyptus grandis
Eucgr.D01306 0.5kb downstream 0.5kb downstream 4789 true Chr04: 16831707-16836495 Eucalyptus grandis
Eucgr.D01306 0.5kb downstream 0.5kb downstream 500 false Chr04: 16835996-16836495 Eucalyptus grandis
Eucgr.D01306 1.0kb upstream 1.0kb upstream 5289 true Chr04: 16830707-16835995 Eucalyptus grandis
Eucgr.D01306 1.0kb upstream 1.0kb upstream 1000 false Chr04: 16830707-16831706 Eucalyptus grandis
Eucgr.D01306 1.0kb downstream 1.0kb downstream 5289 true Chr04: 16831707-16836995 Eucalyptus grandis
Eucgr.D01306 1.0kb downstream 1.0kb downstream 1000 false Chr04: 16835996-16836995 Eucalyptus grandis
Eucgr.D01306 2.0kb upstream 2.0kb upstream 6289 true Chr04: 16829707-16835995 Eucalyptus grandis
Eucgr.D01306 2.0kb upstream 2.0kb upstream 2000 false Chr04: 16829707-16831706 Eucalyptus grandis
Eucgr.D01306 2.0kb downstream 2.0kb downstream 6289 true Chr04: 16831707-16837995 Eucalyptus grandis
Eucgr.D01306 2.0kb downstream 2.0kb downstream 2000 false Chr04: 16835996-16837995 Eucalyptus grandis
Eucgr.D01306 5.0kb upstream 5.0kb upstream 9289 true Chr04: 16826707-16835995 Eucalyptus grandis
Eucgr.D01306 5.0kb upstream 5.0kb upstream 5000 false Chr04: 16826707-16831706 Eucalyptus grandis
Eucgr.D01306 5.0kb downstream 5.0kb downstream 9289 true Chr04: 16831707-16840995 Eucalyptus grandis
Eucgr.D01306 5.0kb downstream 5.0kb downstream 5000 false Chr04: 16835996-16840995 Eucalyptus grandis
Eucgr.D01306 10.0kb upstream 10.0kb upstream 14289 true Chr04: 16821707-16835995 Eucalyptus grandis
Eucgr.D01306 10.0kb upstream 10.0kb upstream 10000 false Chr04: 16821707-16831706 Eucalyptus grandis
Eucgr.D01306 10.0kb downstream 10.0kb downstream 14289 true Chr04: 16831707-16845995 Eucalyptus grandis
Eucgr.D01306 10.0kb downstream 10.0kb downstream 10000 false Chr04: 16835996-16845995 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041507 5273 Angiosperm View MSA
124069086 5270 Rosid View MSA
123749369 5271 Pentapetalae View MSA
122787552 5272 Eudicot View MSA
121347843 5274 Embryophyte View MSA
123423962 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.3375 0.0 26.0778   High
cufflinks 5.24432 0.0 12.9299   Low
cufflinks 8.99509 0.0 21.1309    
cufflinks 6.64552 0.0 16.0446    
cufflinks 6.49387 0.0 15.722    
cufflinks 8.533 0.0 20.0219    

0 Strain