Gene : Eucgr.D02269 E. grandis v2.0
Defline:  (1 of 3) PTHR22855:SF38 - ACETYL-COENZYME A CARBOXYLASE CARBOXYL TRANSFERASE SUBUNIT ALPHA, CHLOROPLASTIC Genomic Order:  1876
Name:  ? Eucgr.D02269 Secondary Identifier:  ? PAC:32051193
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY0-1264 Eucalyptus grandis pathologic  
Egrandis PWY-4381 Eucalyptus grandis pathologic  
Egrandis PWY-5156 Eucalyptus grandis pathologic  
Egrandis PWY-7388 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D02269 0.5kb upstream 0.5kb upstream 5827 true Chr04: 36113514-36119340 Eucalyptus grandis
Eucgr.D02269 0.5kb upstream 0.5kb upstream 500 false Chr04: 36113514-36114013 Eucalyptus grandis
Eucgr.D02269 0.5kb downstream 0.5kb downstream 5827 true Chr04: 36114014-36119840 Eucalyptus grandis
Eucgr.D02269 0.5kb downstream 0.5kb downstream 500 false Chr04: 36119341-36119840 Eucalyptus grandis
Eucgr.D02269 1.0kb upstream 1.0kb upstream 6327 true Chr04: 36113014-36119340 Eucalyptus grandis
Eucgr.D02269 1.0kb upstream 1.0kb upstream 1000 false Chr04: 36113014-36114013 Eucalyptus grandis
Eucgr.D02269 1.0kb downstream 1.0kb downstream 6327 true Chr04: 36114014-36120340 Eucalyptus grandis
Eucgr.D02269 1.0kb downstream 1.0kb downstream 1000 false Chr04: 36119341-36120340 Eucalyptus grandis
Eucgr.D02269 2.0kb upstream 2.0kb upstream 7327 true Chr04: 36112014-36119340 Eucalyptus grandis
Eucgr.D02269 2.0kb upstream 2.0kb upstream 2000 false Chr04: 36112014-36114013 Eucalyptus grandis
Eucgr.D02269 2.0kb downstream 2.0kb downstream 7327 true Chr04: 36114014-36121340 Eucalyptus grandis
Eucgr.D02269 2.0kb downstream 2.0kb downstream 2000 false Chr04: 36119341-36121340 Eucalyptus grandis
Eucgr.D02269 5.0kb upstream 5.0kb upstream 10327 true Chr04: 36109014-36119340 Eucalyptus grandis
Eucgr.D02269 5.0kb upstream 5.0kb upstream 5000 false Chr04: 36109014-36114013 Eucalyptus grandis
Eucgr.D02269 5.0kb downstream 5.0kb downstream 10327 true Chr04: 36114014-36124340 Eucalyptus grandis
Eucgr.D02269 5.0kb downstream 5.0kb downstream 5000 false Chr04: 36119341-36124340 Eucalyptus grandis
Eucgr.D02269 10.0kb upstream 10.0kb upstream 15327 true Chr04: 36104014-36119340 Eucalyptus grandis
Eucgr.D02269 10.0kb upstream 10.0kb upstream 10000 false Chr04: 36104014-36114013 Eucalyptus grandis
Eucgr.D02269 10.0kb downstream 10.0kb downstream 15327 true Chr04: 36114014-36129340 Eucalyptus grandis
Eucgr.D02269 10.0kb downstream 10.0kb downstream 10000 false Chr04: 36119341-36129340 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072210 5270 Rosid View MSA
123744895 5271 Pentapetalae View MSA
122771288 5272 Eudicot View MSA
122050558 5273 Angiosperm View MSA
121311992 5274 Embryophyte View MSA
123426636 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.417651 0.0 1.23863 Low Low
cufflinks 2.73572 0.0 6.6907    
cufflinks 0.67468 0.0 1.89749    
cufflinks 2.24782 0.0 5.60191    
cufflinks 3.79502 0.0 9.00314    
cufflinks 9.31299 0.0 20.8096   High

0 Strain