Gene : Eucgr.D02224 E. grandis v2.0
Defline:  (1 of 2) PTHR10694:SF33 - TRANSCRIPTION FACTOR JUMONJI (JMJ) FAMILY PROTEIN / ZINC FINGER (C5HC2 TYPE) FAMILY PROTEIN Genomic Order:  1837
Name:  ? Eucgr.D02224 Secondary Identifier:  ? PAC:32051027
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D02224 0.5kb upstream 0.5kb upstream 8672 true Chr04: 35748868-35757539 Eucalyptus grandis
Eucgr.D02224 0.5kb upstream 0.5kb upstream 500 false Chr04: 35748868-35749367 Eucalyptus grandis
Eucgr.D02224 0.5kb downstream 0.5kb downstream 8672 true Chr04: 35749368-35758039 Eucalyptus grandis
Eucgr.D02224 0.5kb downstream 0.5kb downstream 500 false Chr04: 35757540-35758039 Eucalyptus grandis
Eucgr.D02224 1.0kb upstream 1.0kb upstream 9172 true Chr04: 35748368-35757539 Eucalyptus grandis
Eucgr.D02224 1.0kb upstream 1.0kb upstream 1000 false Chr04: 35748368-35749367 Eucalyptus grandis
Eucgr.D02224 1.0kb downstream 1.0kb downstream 9172 true Chr04: 35749368-35758539 Eucalyptus grandis
Eucgr.D02224 1.0kb downstream 1.0kb downstream 1000 false Chr04: 35757540-35758539 Eucalyptus grandis
Eucgr.D02224 2.0kb upstream 2.0kb upstream 10172 true Chr04: 35747368-35757539 Eucalyptus grandis
Eucgr.D02224 2.0kb upstream 2.0kb upstream 2000 false Chr04: 35747368-35749367 Eucalyptus grandis
Eucgr.D02224 2.0kb downstream 2.0kb downstream 10172 true Chr04: 35749368-35759539 Eucalyptus grandis
Eucgr.D02224 2.0kb downstream 2.0kb downstream 2000 false Chr04: 35757540-35759539 Eucalyptus grandis
Eucgr.D02224 5.0kb upstream 5.0kb upstream 13172 true Chr04: 35744368-35757539 Eucalyptus grandis
Eucgr.D02224 5.0kb upstream 5.0kb upstream 5000 false Chr04: 35744368-35749367 Eucalyptus grandis
Eucgr.D02224 5.0kb downstream 5.0kb downstream 13172 true Chr04: 35749368-35762539 Eucalyptus grandis
Eucgr.D02224 5.0kb downstream 5.0kb downstream 5000 false Chr04: 35757540-35762539 Eucalyptus grandis
Eucgr.D02224 10.0kb upstream 10.0kb upstream 18172 true Chr04: 35739368-35757539 Eucalyptus grandis
Eucgr.D02224 10.0kb upstream 10.0kb upstream 10000 false Chr04: 35739368-35749367 Eucalyptus grandis
Eucgr.D02224 10.0kb downstream 10.0kb downstream 18172 true Chr04: 35749368-35767539 Eucalyptus grandis
Eucgr.D02224 10.0kb downstream 10.0kb downstream 10000 false Chr04: 35757540-35767539 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063293 5270 Rosid View MSA
123753636 5271 Pentapetalae View MSA
122788405 5272 Eudicot View MSA
122042889 5273 Angiosperm View MSA
123428928 5275 Viridiplantae View MSA
121310039 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.0013 0.0 33.802    
cufflinks 52.5287 0.0 123.435 High  
cufflinks 19.5902 0.0 50.3291    
cufflinks 48.5537 0.0 135.661 High  
cufflinks 54.1192 0.0 127.03 High  
cufflinks 11.4798 0.0 25.8951   Low

0 Strain