Gene : Eucgr.D02205 E. grandis v2.0
Defline:  (1 of 5) PF05340 - Protein of unknown function (DUF740) Genomic Order:  1819
Name:  ? Eucgr.D02205 Secondary Identifier:  ? PAC:32051392
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D02205 0.5kb upstream 0.5kb upstream 1304 true Chr04: 35636420-35637723 Eucalyptus grandis
Eucgr.D02205 0.5kb upstream 0.5kb upstream 500 false Chr04: 35637224-35637723 Eucalyptus grandis
Eucgr.D02205 0.5kb downstream 0.5kb downstream 1304 true Chr04: 35635920-35637223 Eucalyptus grandis
Eucgr.D02205 0.5kb downstream 0.5kb downstream 500 false Chr04: 35635920-35636419 Eucalyptus grandis
Eucgr.D02205 1.0kb upstream 1.0kb upstream 1804 true Chr04: 35636420-35638223 Eucalyptus grandis
Eucgr.D02205 1.0kb upstream 1.0kb upstream 1000 false Chr04: 35637224-35638223 Eucalyptus grandis
Eucgr.D02205 1.0kb downstream 1.0kb downstream 1804 true Chr04: 35635420-35637223 Eucalyptus grandis
Eucgr.D02205 1.0kb downstream 1.0kb downstream 1000 false Chr04: 35635420-35636419 Eucalyptus grandis
Eucgr.D02205 2.0kb upstream 2.0kb upstream 2804 true Chr04: 35636420-35639223 Eucalyptus grandis
Eucgr.D02205 2.0kb upstream 2.0kb upstream 2000 false Chr04: 35637224-35639223 Eucalyptus grandis
Eucgr.D02205 2.0kb downstream 2.0kb downstream 2804 true Chr04: 35634420-35637223 Eucalyptus grandis
Eucgr.D02205 2.0kb downstream 2.0kb downstream 2000 false Chr04: 35634420-35636419 Eucalyptus grandis
Eucgr.D02205 5.0kb upstream 5.0kb upstream 5804 true Chr04: 35636420-35642223 Eucalyptus grandis
Eucgr.D02205 5.0kb upstream 5.0kb upstream 5000 false Chr04: 35637224-35642223 Eucalyptus grandis
Eucgr.D02205 5.0kb downstream 5.0kb downstream 5804 true Chr04: 35631420-35637223 Eucalyptus grandis
Eucgr.D02205 5.0kb downstream 5.0kb downstream 5000 false Chr04: 35631420-35636419 Eucalyptus grandis
Eucgr.D02205 10.0kb upstream 10.0kb upstream 10804 true Chr04: 35636420-35647223 Eucalyptus grandis
Eucgr.D02205 10.0kb upstream 10.0kb upstream 10000 false Chr04: 35637224-35647223 Eucalyptus grandis
Eucgr.D02205 10.0kb downstream 10.0kb downstream 10804 true Chr04: 35626420-35637223 Eucalyptus grandis
Eucgr.D02205 10.0kb downstream 10.0kb downstream 10000 false Chr04: 35626420-35636419 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061108 5270 Rosid View MSA
123749488 5271 Pentapetalae View MSA
122791117 5272 Eudicot View MSA
122045844 5273 Angiosperm View MSA
121310514 5274 Embryophyte View MSA
123347977 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.1833 0.0 69.4255 High High
cufflinks 10.896 0.0 27.9957    
cufflinks 24.8229 0.0 58.8937    
cufflinks 2.71619 0.0 8.10867   Low
cufflinks 2.74637 0.0 8.1019   Low
cufflinks 11.5321 0.0 28.662    

0 Strain