Gene : Eucgr.D02208 E. grandis v2.0
Defline:  (1 of 3) PTHR14155:SF94 - RING-H2 FINGER PROTEIN ATL33-RELATED Genomic Order:  1822
Name:  ? Eucgr.D02208 Secondary Identifier:  ? PAC:32049636
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D02208 0.5kb upstream 0.5kb upstream 1540 true Chr04: 35664530-35666069 Eucalyptus grandis
Eucgr.D02208 0.5kb upstream 0.5kb upstream 500 false Chr04: 35664530-35665029 Eucalyptus grandis
Eucgr.D02208 0.5kb downstream 0.5kb downstream 1540 true Chr04: 35665030-35666569 Eucalyptus grandis
Eucgr.D02208 0.5kb downstream 0.5kb downstream 500 false Chr04: 35666070-35666569 Eucalyptus grandis
Eucgr.D02208 1.0kb upstream 1.0kb upstream 2040 true Chr04: 35664030-35666069 Eucalyptus grandis
Eucgr.D02208 1.0kb upstream 1.0kb upstream 1000 false Chr04: 35664030-35665029 Eucalyptus grandis
Eucgr.D02208 1.0kb downstream 1.0kb downstream 2040 true Chr04: 35665030-35667069 Eucalyptus grandis
Eucgr.D02208 1.0kb downstream 1.0kb downstream 1000 false Chr04: 35666070-35667069 Eucalyptus grandis
Eucgr.D02208 2.0kb upstream 2.0kb upstream 3040 true Chr04: 35663030-35666069 Eucalyptus grandis
Eucgr.D02208 2.0kb upstream 2.0kb upstream 2000 false Chr04: 35663030-35665029 Eucalyptus grandis
Eucgr.D02208 2.0kb downstream 2.0kb downstream 3040 true Chr04: 35665030-35668069 Eucalyptus grandis
Eucgr.D02208 2.0kb downstream 2.0kb downstream 2000 false Chr04: 35666070-35668069 Eucalyptus grandis
Eucgr.D02208 5.0kb upstream 5.0kb upstream 6040 true Chr04: 35660030-35666069 Eucalyptus grandis
Eucgr.D02208 5.0kb upstream 5.0kb upstream 5000 false Chr04: 35660030-35665029 Eucalyptus grandis
Eucgr.D02208 5.0kb downstream 5.0kb downstream 6040 true Chr04: 35665030-35671069 Eucalyptus grandis
Eucgr.D02208 5.0kb downstream 5.0kb downstream 5000 false Chr04: 35666070-35671069 Eucalyptus grandis
Eucgr.D02208 10.0kb upstream 10.0kb upstream 11040 true Chr04: 35655030-35666069 Eucalyptus grandis
Eucgr.D02208 10.0kb upstream 10.0kb upstream 10000 false Chr04: 35655030-35665029 Eucalyptus grandis
Eucgr.D02208 10.0kb downstream 10.0kb downstream 11040 true Chr04: 35665030-35676069 Eucalyptus grandis
Eucgr.D02208 10.0kb downstream 10.0kb downstream 10000 false Chr04: 35666070-35676069 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072575 5270 Rosid View MSA
123753111 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.957283 0.0 2.97815   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.352878 0.0 1.25311 Low  
cufflinks 0.439415 0.0 1.50884    
cufflinks 0.489227 0.0 1.65621 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain