Gene : Eucgr.D02184 E. grandis v2.0
Defline:  (1 of 2) PTHR10044:SF133 - MND1-INTERACTING PROTEIN 1 Genomic Order:  1800
Name:  ? Eucgr.D02184 Secondary Identifier:  ? PAC:32051023
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D02184 0.5kb upstream 0.5kb upstream 5977 true Chr04: 35421273-35427249 Eucalyptus grandis
Eucgr.D02184 0.5kb upstream 0.5kb upstream 500 false Chr04: 35426750-35427249 Eucalyptus grandis
Eucgr.D02184 0.5kb downstream 0.5kb downstream 5977 true Chr04: 35420773-35426749 Eucalyptus grandis
Eucgr.D02184 0.5kb downstream 0.5kb downstream 500 false Chr04: 35420773-35421272 Eucalyptus grandis
Eucgr.D02184 1.0kb upstream 1.0kb upstream 6477 true Chr04: 35421273-35427749 Eucalyptus grandis
Eucgr.D02184 1.0kb upstream 1.0kb upstream 1000 false Chr04: 35426750-35427749 Eucalyptus grandis
Eucgr.D02184 1.0kb downstream 1.0kb downstream 6477 true Chr04: 35420273-35426749 Eucalyptus grandis
Eucgr.D02184 1.0kb downstream 1.0kb downstream 1000 false Chr04: 35420273-35421272 Eucalyptus grandis
Eucgr.D02184 2.0kb upstream 2.0kb upstream 7477 true Chr04: 35421273-35428749 Eucalyptus grandis
Eucgr.D02184 2.0kb upstream 2.0kb upstream 2000 false Chr04: 35426750-35428749 Eucalyptus grandis
Eucgr.D02184 2.0kb downstream 2.0kb downstream 7477 true Chr04: 35419273-35426749 Eucalyptus grandis
Eucgr.D02184 2.0kb downstream 2.0kb downstream 2000 false Chr04: 35419273-35421272 Eucalyptus grandis
Eucgr.D02184 5.0kb upstream 5.0kb upstream 10477 true Chr04: 35421273-35431749 Eucalyptus grandis
Eucgr.D02184 5.0kb upstream 5.0kb upstream 5000 false Chr04: 35426750-35431749 Eucalyptus grandis
Eucgr.D02184 5.0kb downstream 5.0kb downstream 10477 true Chr04: 35416273-35426749 Eucalyptus grandis
Eucgr.D02184 5.0kb downstream 5.0kb downstream 5000 false Chr04: 35416273-35421272 Eucalyptus grandis
Eucgr.D02184 10.0kb upstream 10.0kb upstream 15477 true Chr04: 35421273-35436749 Eucalyptus grandis
Eucgr.D02184 10.0kb upstream 10.0kb upstream 10000 false Chr04: 35426750-35436749 Eucalyptus grandis
Eucgr.D02184 10.0kb downstream 10.0kb downstream 15477 true Chr04: 35411273-35426749 Eucalyptus grandis
Eucgr.D02184 10.0kb downstream 10.0kb downstream 10000 false Chr04: 35411273-35421272 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064892 5270 Rosid View MSA
123750786 5271 Pentapetalae View MSA
122796031 5272 Eudicot View MSA
122045925 5273 Angiosperm View MSA
121349684 5274 Embryophyte View MSA
123427372 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.99296 0.0 22.5456   High
cufflinks 3.75566 0.0 8.90537    
cufflinks 5.79348 0.0 15.2618    
cufflinks 6.02231 0.0 14.3479    
cufflinks 2.11707 0.0 5.38754   Low
cufflinks 7.37277 0.0 17.0486    

0 Strain