Gene : Eucgr.D02180 E. grandis v2.0
Defline:  (1 of 1) PTHR13527:SF0 - SAYSVFN DOMAIN-CONTAINING PROTEIN 1 Genomic Order:  1796
Name:  ? Eucgr.D02180 Secondary Identifier:  ? PAC:32050160
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D02180 0.5kb upstream 0.5kb upstream 3974 true Chr04: 35387991-35391964 Eucalyptus grandis
Eucgr.D02180 0.5kb upstream 0.5kb upstream 500 false Chr04: 35387991-35388490 Eucalyptus grandis
Eucgr.D02180 0.5kb downstream 0.5kb downstream 3974 true Chr04: 35388491-35392464 Eucalyptus grandis
Eucgr.D02180 0.5kb downstream 0.5kb downstream 500 false Chr04: 35391965-35392464 Eucalyptus grandis
Eucgr.D02180 1.0kb upstream 1.0kb upstream 4474 true Chr04: 35387491-35391964 Eucalyptus grandis
Eucgr.D02180 1.0kb upstream 1.0kb upstream 1000 false Chr04: 35387491-35388490 Eucalyptus grandis
Eucgr.D02180 1.0kb downstream 1.0kb downstream 4474 true Chr04: 35388491-35392964 Eucalyptus grandis
Eucgr.D02180 1.0kb downstream 1.0kb downstream 1000 false Chr04: 35391965-35392964 Eucalyptus grandis
Eucgr.D02180 2.0kb upstream 2.0kb upstream 5474 true Chr04: 35386491-35391964 Eucalyptus grandis
Eucgr.D02180 2.0kb upstream 2.0kb upstream 2000 false Chr04: 35386491-35388490 Eucalyptus grandis
Eucgr.D02180 2.0kb downstream 2.0kb downstream 5474 true Chr04: 35388491-35393964 Eucalyptus grandis
Eucgr.D02180 2.0kb downstream 2.0kb downstream 2000 false Chr04: 35391965-35393964 Eucalyptus grandis
Eucgr.D02180 5.0kb upstream 5.0kb upstream 8474 true Chr04: 35383491-35391964 Eucalyptus grandis
Eucgr.D02180 5.0kb upstream 5.0kb upstream 5000 false Chr04: 35383491-35388490 Eucalyptus grandis
Eucgr.D02180 5.0kb downstream 5.0kb downstream 8474 true Chr04: 35388491-35396964 Eucalyptus grandis
Eucgr.D02180 5.0kb downstream 5.0kb downstream 5000 false Chr04: 35391965-35396964 Eucalyptus grandis
Eucgr.D02180 10.0kb upstream 10.0kb upstream 13474 true Chr04: 35378491-35391964 Eucalyptus grandis
Eucgr.D02180 10.0kb upstream 10.0kb upstream 10000 false Chr04: 35378491-35388490 Eucalyptus grandis
Eucgr.D02180 10.0kb downstream 10.0kb downstream 13474 true Chr04: 35388491-35401964 Eucalyptus grandis
Eucgr.D02180 10.0kb downstream 10.0kb downstream 10000 false Chr04: 35391965-35401964 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068007 5270 Rosid View MSA
123749839 5271 Pentapetalae View MSA
122786941 5272 Eudicot View MSA
122045022 5273 Angiosperm View MSA
121347304 5274 Embryophyte View MSA
123428664 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.9803 0.0 36.7229    
cufflinks 32.6647 0.0 72.4681    
cufflinks 20.6213 0.0 46.5451    
cufflinks 46.8661 0.0 103.647 High High
cufflinks 36.0008 0.0 79.8102    
cufflinks 9.92143 0.0 23.7576   Low

0 Strain