Gene : Eucgr.D02142 E. grandis v2.0
Defline:  (1 of 1) PTHR16166:SF105 - PLECKSTRIN HOMOLOGY (PH) DOMAIN-CONTAINING PROTEIN Genomic Order:  1763
Name:  ? Eucgr.D02142 Secondary Identifier:  ? PAC:32051271
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D02142 0.5kb upstream 0.5kb upstream 27852 true Chr04: 34842361-34870212 Eucalyptus grandis
Eucgr.D02142 0.5kb upstream 0.5kb upstream 500 false Chr04: 34869713-34870212 Eucalyptus grandis
Eucgr.D02142 0.5kb downstream 0.5kb downstream 27852 true Chr04: 34841861-34869712 Eucalyptus grandis
Eucgr.D02142 0.5kb downstream 0.5kb downstream 500 false Chr04: 34841861-34842360 Eucalyptus grandis
Eucgr.D02142 1.0kb upstream 1.0kb upstream 28352 true Chr04: 34842361-34870712 Eucalyptus grandis
Eucgr.D02142 1.0kb upstream 1.0kb upstream 1000 false Chr04: 34869713-34870712 Eucalyptus grandis
Eucgr.D02142 1.0kb downstream 1.0kb downstream 28352 true Chr04: 34841361-34869712 Eucalyptus grandis
Eucgr.D02142 1.0kb downstream 1.0kb downstream 1000 false Chr04: 34841361-34842360 Eucalyptus grandis
Eucgr.D02142 2.0kb upstream 2.0kb upstream 29352 true Chr04: 34842361-34871712 Eucalyptus grandis
Eucgr.D02142 2.0kb upstream 2.0kb upstream 2000 false Chr04: 34869713-34871712 Eucalyptus grandis
Eucgr.D02142 2.0kb downstream 2.0kb downstream 29352 true Chr04: 34840361-34869712 Eucalyptus grandis
Eucgr.D02142 2.0kb downstream 2.0kb downstream 2000 false Chr04: 34840361-34842360 Eucalyptus grandis
Eucgr.D02142 5.0kb upstream 5.0kb upstream 32352 true Chr04: 34842361-34874712 Eucalyptus grandis
Eucgr.D02142 5.0kb upstream 5.0kb upstream 5000 false Chr04: 34869713-34874712 Eucalyptus grandis
Eucgr.D02142 5.0kb downstream 5.0kb downstream 32352 true Chr04: 34837361-34869712 Eucalyptus grandis
Eucgr.D02142 5.0kb downstream 5.0kb downstream 5000 false Chr04: 34837361-34842360 Eucalyptus grandis
Eucgr.D02142 10.0kb upstream 10.0kb upstream 37352 true Chr04: 34842361-34879712 Eucalyptus grandis
Eucgr.D02142 10.0kb upstream 10.0kb upstream 10000 false Chr04: 34869713-34879712 Eucalyptus grandis
Eucgr.D02142 10.0kb downstream 10.0kb downstream 37352 true Chr04: 34832361-34869712 Eucalyptus grandis
Eucgr.D02142 10.0kb downstream 10.0kb downstream 10000 false Chr04: 34832361-34842360 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124051045 5270 Rosid View MSA
123737452 5271 Pentapetalae View MSA
122785660 5272 Eudicot View MSA
122048720 5273 Angiosperm View MSA
121349358 5274 Embryophyte View MSA
123424206 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.3772 0.0 27.7262   Low
cufflinks 55.2366 0.0 185.438 High High
cufflinks 15.0983 0.0 41.7963    
cufflinks 51.6533 0.0 175.584 High  
cufflinks 28.0426 0.0 79.2213    
cufflinks 32.2101 0.0 98.3701    

0 Strain