Gene : Eucgr.D02126 E. grandis v2.0
Defline:  (1 of 3) PTHR10809:SF42 - VESICLE-ASSOCIATED PROTEIN 2-1 Genomic Order:  1749
Name:  ? Eucgr.D02126 Secondary Identifier:  ? PAC:32049888
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D02126 0.5kb upstream 0.5kb upstream 5198 true Chr04: 34696430-34701627 Eucalyptus grandis
Eucgr.D02126 0.5kb upstream 0.5kb upstream 500 false Chr04: 34696430-34696929 Eucalyptus grandis
Eucgr.D02126 0.5kb downstream 0.5kb downstream 5198 true Chr04: 34696930-34702127 Eucalyptus grandis
Eucgr.D02126 0.5kb downstream 0.5kb downstream 500 false Chr04: 34701628-34702127 Eucalyptus grandis
Eucgr.D02126 1.0kb upstream 1.0kb upstream 5698 true Chr04: 34695930-34701627 Eucalyptus grandis
Eucgr.D02126 1.0kb upstream 1.0kb upstream 1000 false Chr04: 34695930-34696929 Eucalyptus grandis
Eucgr.D02126 1.0kb downstream 1.0kb downstream 5698 true Chr04: 34696930-34702627 Eucalyptus grandis
Eucgr.D02126 1.0kb downstream 1.0kb downstream 1000 false Chr04: 34701628-34702627 Eucalyptus grandis
Eucgr.D02126 2.0kb upstream 2.0kb upstream 6698 true Chr04: 34694930-34701627 Eucalyptus grandis
Eucgr.D02126 2.0kb upstream 2.0kb upstream 2000 false Chr04: 34694930-34696929 Eucalyptus grandis
Eucgr.D02126 2.0kb downstream 2.0kb downstream 6698 true Chr04: 34696930-34703627 Eucalyptus grandis
Eucgr.D02126 2.0kb downstream 2.0kb downstream 2000 false Chr04: 34701628-34703627 Eucalyptus grandis
Eucgr.D02126 5.0kb upstream 5.0kb upstream 9698 true Chr04: 34691930-34701627 Eucalyptus grandis
Eucgr.D02126 5.0kb upstream 5.0kb upstream 5000 false Chr04: 34691930-34696929 Eucalyptus grandis
Eucgr.D02126 5.0kb downstream 5.0kb downstream 9698 true Chr04: 34696930-34706627 Eucalyptus grandis
Eucgr.D02126 5.0kb downstream 5.0kb downstream 5000 false Chr04: 34701628-34706627 Eucalyptus grandis
Eucgr.D02126 10.0kb upstream 10.0kb upstream 14698 true Chr04: 34686930-34701627 Eucalyptus grandis
Eucgr.D02126 10.0kb upstream 10.0kb upstream 10000 false Chr04: 34686930-34696929 Eucalyptus grandis
Eucgr.D02126 10.0kb downstream 10.0kb downstream 14698 true Chr04: 34696930-34711627 Eucalyptus grandis
Eucgr.D02126 10.0kb downstream 10.0kb downstream 10000 false Chr04: 34701628-34711627 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070661 5270 Rosid View MSA
123750934 5271 Pentapetalae View MSA
122796486 5272 Eudicot View MSA
122049501 5273 Angiosperm View MSA
121311441 5274 Embryophyte View MSA
123348736 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.53381 0.0 12.5497    
cufflinks 3.71759 0.0 10.4238    
cufflinks 3.49976 0.0 9.81496    
cufflinks 2.4951 0.0 7.2609   Low
cufflinks 2.5859 0.0 7.46489   Low
cufflinks 5.59467 0.0 15.1244   High

0 Strain