Gene : Eucgr.D02114 E. grandis v2.0
Defline:  (1 of 1) PTHR11941:SF61 - PROTEIN ECH-5 Genomic Order:  1737
Name:  ? Eucgr.D02114 Secondary Identifier:  ? PAC:32052125
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis LEU-DEG2-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D02114 0.5kb upstream 0.5kb upstream 5202 true Chr04: 34614892-34620093 Eucalyptus grandis
Eucgr.D02114 0.5kb upstream 0.5kb upstream 500 false Chr04: 34619594-34620093 Eucalyptus grandis
Eucgr.D02114 0.5kb downstream 0.5kb downstream 5202 true Chr04: 34614392-34619593 Eucalyptus grandis
Eucgr.D02114 0.5kb downstream 0.5kb downstream 500 false Chr04: 34614392-34614891 Eucalyptus grandis
Eucgr.D02114 1.0kb upstream 1.0kb upstream 5702 true Chr04: 34614892-34620593 Eucalyptus grandis
Eucgr.D02114 1.0kb upstream 1.0kb upstream 1000 false Chr04: 34619594-34620593 Eucalyptus grandis
Eucgr.D02114 1.0kb downstream 1.0kb downstream 5702 true Chr04: 34613892-34619593 Eucalyptus grandis
Eucgr.D02114 1.0kb downstream 1.0kb downstream 1000 false Chr04: 34613892-34614891 Eucalyptus grandis
Eucgr.D02114 2.0kb upstream 2.0kb upstream 6702 true Chr04: 34614892-34621593 Eucalyptus grandis
Eucgr.D02114 2.0kb upstream 2.0kb upstream 2000 false Chr04: 34619594-34621593 Eucalyptus grandis
Eucgr.D02114 2.0kb downstream 2.0kb downstream 6702 true Chr04: 34612892-34619593 Eucalyptus grandis
Eucgr.D02114 2.0kb downstream 2.0kb downstream 2000 false Chr04: 34612892-34614891 Eucalyptus grandis
Eucgr.D02114 5.0kb upstream 5.0kb upstream 9702 true Chr04: 34614892-34624593 Eucalyptus grandis
Eucgr.D02114 5.0kb upstream 5.0kb upstream 5000 false Chr04: 34619594-34624593 Eucalyptus grandis
Eucgr.D02114 5.0kb downstream 5.0kb downstream 9702 true Chr04: 34609892-34619593 Eucalyptus grandis
Eucgr.D02114 5.0kb downstream 5.0kb downstream 5000 false Chr04: 34609892-34614891 Eucalyptus grandis
Eucgr.D02114 10.0kb upstream 10.0kb upstream 14702 true Chr04: 34614892-34629593 Eucalyptus grandis
Eucgr.D02114 10.0kb upstream 10.0kb upstream 10000 false Chr04: 34619594-34629593 Eucalyptus grandis
Eucgr.D02114 10.0kb downstream 10.0kb downstream 14702 true Chr04: 34604892-34619593 Eucalyptus grandis
Eucgr.D02114 10.0kb downstream 10.0kb downstream 10000 false Chr04: 34604892-34614891 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069005 5270 Rosid View MSA
123739015 5271 Pentapetalae View MSA
122790936 5272 Eudicot View MSA
122045797 5273 Angiosperm View MSA
121351751 5274 Embryophyte View MSA
123427880 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.35556 0.0 17.5329    
cufflinks 3.78103 0.0 9.93507    
cufflinks 6.21611 0.0 15.1692    
cufflinks 3.53045 0.0 9.33446    
cufflinks 2.65412 0.0 7.41448   Low
cufflinks 13.3847 0.0 31.6233   High

0 Strain