Gene : Eucgr.D02079 E. grandis v2.0
Defline:  (1 of 1) PTHR10556:SF37 - 3-OXO-5-ALPHA-STEROID 4-DEHYDROGENASE 2 Genomic Order:  1704
Name:  ? Eucgr.D02079 Secondary Identifier:  ? PAC:32050605
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D02079 0.5kb upstream 0.5kb upstream 2916 true Chr04: 34307366-34310281 Eucalyptus grandis
Eucgr.D02079 0.5kb upstream 0.5kb upstream 500 false Chr04: 34307366-34307865 Eucalyptus grandis
Eucgr.D02079 0.5kb downstream 0.5kb downstream 2916 true Chr04: 34307866-34310781 Eucalyptus grandis
Eucgr.D02079 0.5kb downstream 0.5kb downstream 500 false Chr04: 34310282-34310781 Eucalyptus grandis
Eucgr.D02079 1.0kb upstream 1.0kb upstream 3416 true Chr04: 34306866-34310281 Eucalyptus grandis
Eucgr.D02079 1.0kb upstream 1.0kb upstream 1000 false Chr04: 34306866-34307865 Eucalyptus grandis
Eucgr.D02079 1.0kb downstream 1.0kb downstream 3416 true Chr04: 34307866-34311281 Eucalyptus grandis
Eucgr.D02079 1.0kb downstream 1.0kb downstream 1000 false Chr04: 34310282-34311281 Eucalyptus grandis
Eucgr.D02079 2.0kb upstream 2.0kb upstream 4416 true Chr04: 34305866-34310281 Eucalyptus grandis
Eucgr.D02079 2.0kb upstream 2.0kb upstream 2000 false Chr04: 34305866-34307865 Eucalyptus grandis
Eucgr.D02079 2.0kb downstream 2.0kb downstream 4416 true Chr04: 34307866-34312281 Eucalyptus grandis
Eucgr.D02079 2.0kb downstream 2.0kb downstream 2000 false Chr04: 34310282-34312281 Eucalyptus grandis
Eucgr.D02079 5.0kb upstream 5.0kb upstream 7416 true Chr04: 34302866-34310281 Eucalyptus grandis
Eucgr.D02079 5.0kb upstream 5.0kb upstream 5000 false Chr04: 34302866-34307865 Eucalyptus grandis
Eucgr.D02079 5.0kb downstream 5.0kb downstream 7416 true Chr04: 34307866-34315281 Eucalyptus grandis
Eucgr.D02079 5.0kb downstream 5.0kb downstream 5000 false Chr04: 34310282-34315281 Eucalyptus grandis
Eucgr.D02079 10.0kb upstream 10.0kb upstream 12416 true Chr04: 34297866-34310281 Eucalyptus grandis
Eucgr.D02079 10.0kb upstream 10.0kb upstream 10000 false Chr04: 34297866-34307865 Eucalyptus grandis
Eucgr.D02079 10.0kb downstream 10.0kb downstream 12416 true Chr04: 34307866-34320281 Eucalyptus grandis
Eucgr.D02079 10.0kb downstream 10.0kb downstream 10000 false Chr04: 34310282-34320281 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064242 5270 Rosid View MSA
123736614 5271 Pentapetalae View MSA
122785664 5272 Eudicot View MSA
122045974 5273 Angiosperm View MSA
121350714 5274 Embryophyte View MSA
123428210 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.51947 0.0 18.7098   Low
cufflinks 9.46009 0.0 22.127    
cufflinks 9.96072 0.0 29.305    
cufflinks 12.3259 0.0 35.8376    
cufflinks 17.3943 0.0 42.8237   High
cufflinks 13.77 0.0 35.1787    

0 Strain