Gene : Eucgr.D02098 E. grandis v2.0
Defline:  (1 of 1) PTHR11062:SF59 - EXOSTOSIN FAMILY PROTEIN Genomic Order:  1722
Name:  ? Eucgr.D02098 Secondary Identifier:  ? PAC:32049869
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5980 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D02098 0.5kb upstream 0.5kb upstream 5473 true Chr04: 34446104-34451576 Eucalyptus grandis
Eucgr.D02098 0.5kb upstream 0.5kb upstream 500 false Chr04: 34446104-34446603 Eucalyptus grandis
Eucgr.D02098 0.5kb downstream 0.5kb downstream 5473 true Chr04: 34446604-34452076 Eucalyptus grandis
Eucgr.D02098 0.5kb downstream 0.5kb downstream 500 false Chr04: 34451577-34452076 Eucalyptus grandis
Eucgr.D02098 1.0kb upstream 1.0kb upstream 5973 true Chr04: 34445604-34451576 Eucalyptus grandis
Eucgr.D02098 1.0kb upstream 1.0kb upstream 1000 false Chr04: 34445604-34446603 Eucalyptus grandis
Eucgr.D02098 1.0kb downstream 1.0kb downstream 5973 true Chr04: 34446604-34452576 Eucalyptus grandis
Eucgr.D02098 1.0kb downstream 1.0kb downstream 1000 false Chr04: 34451577-34452576 Eucalyptus grandis
Eucgr.D02098 2.0kb upstream 2.0kb upstream 6973 true Chr04: 34444604-34451576 Eucalyptus grandis
Eucgr.D02098 2.0kb upstream 2.0kb upstream 2000 false Chr04: 34444604-34446603 Eucalyptus grandis
Eucgr.D02098 2.0kb downstream 2.0kb downstream 6973 true Chr04: 34446604-34453576 Eucalyptus grandis
Eucgr.D02098 2.0kb downstream 2.0kb downstream 2000 false Chr04: 34451577-34453576 Eucalyptus grandis
Eucgr.D02098 5.0kb upstream 5.0kb upstream 9973 true Chr04: 34441604-34451576 Eucalyptus grandis
Eucgr.D02098 5.0kb upstream 5.0kb upstream 5000 false Chr04: 34441604-34446603 Eucalyptus grandis
Eucgr.D02098 5.0kb downstream 5.0kb downstream 9973 true Chr04: 34446604-34456576 Eucalyptus grandis
Eucgr.D02098 5.0kb downstream 5.0kb downstream 5000 false Chr04: 34451577-34456576 Eucalyptus grandis
Eucgr.D02098 10.0kb upstream 10.0kb upstream 14973 true Chr04: 34436604-34451576 Eucalyptus grandis
Eucgr.D02098 10.0kb upstream 10.0kb upstream 10000 false Chr04: 34436604-34446603 Eucalyptus grandis
Eucgr.D02098 10.0kb downstream 10.0kb downstream 14973 true Chr04: 34446604-34461576 Eucalyptus grandis
Eucgr.D02098 10.0kb downstream 10.0kb downstream 10000 false Chr04: 34451577-34461576 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063167 5270 Rosid View MSA
123741138 5271 Pentapetalae View MSA
122789943 5272 Eudicot View MSA
122046187 5273 Angiosperm View MSA
121349832 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.16735 0.0 3.24484   Low
cufflinks 3.55074 0.0 8.75437    
cufflinks 1.93698 0.0 5.09763    
cufflinks 6.73653 0.0 15.6432   High
cufflinks 4.98 0.0 11.9027    
cufflinks 2.07848 0.0 5.48787    

0 Strain