Gene : Eucgr.D02031 E. grandis v2.0
Defline:  (1 of 3) PTHR10788:SF38 - TREHALOSE-PHOSPHATE PHOSPHATASE F-RELATED Genomic Order:  1676
Name:  ? Eucgr.D02031 Secondary Identifier:  ? PAC:32052256
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D02031 0.5kb upstream 0.5kb upstream 3822 true Chr04: 33953795-33957616 Eucalyptus grandis
Eucgr.D02031 0.5kb upstream 0.5kb upstream 500 false Chr04: 33957117-33957616 Eucalyptus grandis
Eucgr.D02031 0.5kb downstream 0.5kb downstream 3822 true Chr04: 33953295-33957116 Eucalyptus grandis
Eucgr.D02031 0.5kb downstream 0.5kb downstream 500 false Chr04: 33953295-33953794 Eucalyptus grandis
Eucgr.D02031 1.0kb upstream 1.0kb upstream 4322 true Chr04: 33953795-33958116 Eucalyptus grandis
Eucgr.D02031 1.0kb upstream 1.0kb upstream 1000 false Chr04: 33957117-33958116 Eucalyptus grandis
Eucgr.D02031 1.0kb downstream 1.0kb downstream 4322 true Chr04: 33952795-33957116 Eucalyptus grandis
Eucgr.D02031 1.0kb downstream 1.0kb downstream 1000 false Chr04: 33952795-33953794 Eucalyptus grandis
Eucgr.D02031 2.0kb upstream 2.0kb upstream 5322 true Chr04: 33953795-33959116 Eucalyptus grandis
Eucgr.D02031 2.0kb upstream 2.0kb upstream 2000 false Chr04: 33957117-33959116 Eucalyptus grandis
Eucgr.D02031 2.0kb downstream 2.0kb downstream 5322 true Chr04: 33951795-33957116 Eucalyptus grandis
Eucgr.D02031 2.0kb downstream 2.0kb downstream 2000 false Chr04: 33951795-33953794 Eucalyptus grandis
Eucgr.D02031 5.0kb upstream 5.0kb upstream 8322 true Chr04: 33953795-33962116 Eucalyptus grandis
Eucgr.D02031 5.0kb upstream 5.0kb upstream 5000 false Chr04: 33957117-33962116 Eucalyptus grandis
Eucgr.D02031 5.0kb downstream 5.0kb downstream 8322 true Chr04: 33948795-33957116 Eucalyptus grandis
Eucgr.D02031 5.0kb downstream 5.0kb downstream 5000 false Chr04: 33948795-33953794 Eucalyptus grandis
Eucgr.D02031 10.0kb upstream 10.0kb upstream 13322 true Chr04: 33953795-33967116 Eucalyptus grandis
Eucgr.D02031 10.0kb upstream 10.0kb upstream 10000 false Chr04: 33957117-33967116 Eucalyptus grandis
Eucgr.D02031 10.0kb downstream 10.0kb downstream 13322 true Chr04: 33943795-33957116 Eucalyptus grandis
Eucgr.D02031 10.0kb downstream 10.0kb downstream 10000 false Chr04: 33943795-33953794 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065579 5270 Rosid View MSA
123746570 5271 Pentapetalae View MSA
122792974 5272 Eudicot View MSA
122044363 5273 Angiosperm View MSA
121351669 5274 Embryophyte View MSA
123427869 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.5696 0.0 34.7676    
cufflinks 4.43876 0.0 10.776    
cufflinks 25.3503 0.0 56.0612   High
cufflinks 4.99063 0.0 11.9787    
cufflinks 0.915619 0.0 2.61784   Low
cufflinks 12.1844 0.0 27.6135    

0 Strain