Gene : Eucgr.D01989 E. grandis v2.0
Defline:  (1 of 2) PTHR22602:SF0 - TRANSFERASE CAF17, MITOCHONDRIAL-RELATED Genomic Order:  1638
Name:  ? Eucgr.D01989 Secondary Identifier:  ? PAC:32052288
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D01989 0.5kb upstream 0.5kb upstream 4313 true Chr04: 33480611-33484923 Eucalyptus grandis
Eucgr.D01989 0.5kb upstream 0.5kb upstream 500 false Chr04: 33480611-33481110 Eucalyptus grandis
Eucgr.D01989 0.5kb downstream 0.5kb downstream 4313 true Chr04: 33481111-33485423 Eucalyptus grandis
Eucgr.D01989 0.5kb downstream 0.5kb downstream 500 false Chr04: 33484924-33485423 Eucalyptus grandis
Eucgr.D01989 1.0kb upstream 1.0kb upstream 4813 true Chr04: 33480111-33484923 Eucalyptus grandis
Eucgr.D01989 1.0kb upstream 1.0kb upstream 1000 false Chr04: 33480111-33481110 Eucalyptus grandis
Eucgr.D01989 1.0kb downstream 1.0kb downstream 4813 true Chr04: 33481111-33485923 Eucalyptus grandis
Eucgr.D01989 1.0kb downstream 1.0kb downstream 1000 false Chr04: 33484924-33485923 Eucalyptus grandis
Eucgr.D01989 2.0kb upstream 2.0kb upstream 5813 true Chr04: 33479111-33484923 Eucalyptus grandis
Eucgr.D01989 2.0kb upstream 2.0kb upstream 2000 false Chr04: 33479111-33481110 Eucalyptus grandis
Eucgr.D01989 2.0kb downstream 2.0kb downstream 5813 true Chr04: 33481111-33486923 Eucalyptus grandis
Eucgr.D01989 2.0kb downstream 2.0kb downstream 2000 false Chr04: 33484924-33486923 Eucalyptus grandis
Eucgr.D01989 5.0kb upstream 5.0kb upstream 8813 true Chr04: 33476111-33484923 Eucalyptus grandis
Eucgr.D01989 5.0kb upstream 5.0kb upstream 5000 false Chr04: 33476111-33481110 Eucalyptus grandis
Eucgr.D01989 5.0kb downstream 5.0kb downstream 8813 true Chr04: 33481111-33489923 Eucalyptus grandis
Eucgr.D01989 5.0kb downstream 5.0kb downstream 5000 false Chr04: 33484924-33489923 Eucalyptus grandis
Eucgr.D01989 10.0kb upstream 10.0kb upstream 13813 true Chr04: 33471111-33484923 Eucalyptus grandis
Eucgr.D01989 10.0kb upstream 10.0kb upstream 10000 false Chr04: 33471111-33481110 Eucalyptus grandis
Eucgr.D01989 10.0kb downstream 10.0kb downstream 13813 true Chr04: 33481111-33494923 Eucalyptus grandis
Eucgr.D01989 10.0kb downstream 10.0kb downstream 10000 false Chr04: 33484924-33494923 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067186 5270 Rosid View MSA
123745286 5271 Pentapetalae View MSA
122786826 5272 Eudicot View MSA
122047678 5273 Angiosperm View MSA
121345221 5274 Embryophyte View MSA
123428171 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.46621 0.0 15.4072    
cufflinks 15.9234 0.0 35.6927    
cufflinks 5.83819 0.0 14.1152    
cufflinks 31.2379 0.0 69.081   High
cufflinks 19.8828 0.0 44.2113    
cufflinks 4.56312 0.0 11.2412   Low

0 Strain