Gene : Eucgr.D01949 E. grandis v2.0
Defline:  (1 of 1) PTHR12357:SF32 - YTH FAMILY PROTEIN Genomic Order:  1602
Name:  ? Eucgr.D01949 Secondary Identifier:  ? PAC:32051325
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D01949 0.5kb upstream 0.5kb upstream 6719 true Chr04: 33050217-33056935 Eucalyptus grandis
Eucgr.D01949 0.5kb upstream 0.5kb upstream 500 false Chr04: 33050217-33050716 Eucalyptus grandis
Eucgr.D01949 0.5kb downstream 0.5kb downstream 6719 true Chr04: 33050717-33057435 Eucalyptus grandis
Eucgr.D01949 0.5kb downstream 0.5kb downstream 500 false Chr04: 33056936-33057435 Eucalyptus grandis
Eucgr.D01949 1.0kb upstream 1.0kb upstream 7219 true Chr04: 33049717-33056935 Eucalyptus grandis
Eucgr.D01949 1.0kb upstream 1.0kb upstream 1000 false Chr04: 33049717-33050716 Eucalyptus grandis
Eucgr.D01949 1.0kb downstream 1.0kb downstream 7219 true Chr04: 33050717-33057935 Eucalyptus grandis
Eucgr.D01949 1.0kb downstream 1.0kb downstream 1000 false Chr04: 33056936-33057935 Eucalyptus grandis
Eucgr.D01949 2.0kb upstream 2.0kb upstream 8219 true Chr04: 33048717-33056935 Eucalyptus grandis
Eucgr.D01949 2.0kb upstream 2.0kb upstream 2000 false Chr04: 33048717-33050716 Eucalyptus grandis
Eucgr.D01949 2.0kb downstream 2.0kb downstream 8219 true Chr04: 33050717-33058935 Eucalyptus grandis
Eucgr.D01949 2.0kb downstream 2.0kb downstream 2000 false Chr04: 33056936-33058935 Eucalyptus grandis
Eucgr.D01949 5.0kb upstream 5.0kb upstream 11219 true Chr04: 33045717-33056935 Eucalyptus grandis
Eucgr.D01949 5.0kb upstream 5.0kb upstream 5000 false Chr04: 33045717-33050716 Eucalyptus grandis
Eucgr.D01949 5.0kb downstream 5.0kb downstream 11219 true Chr04: 33050717-33061935 Eucalyptus grandis
Eucgr.D01949 5.0kb downstream 5.0kb downstream 5000 false Chr04: 33056936-33061935 Eucalyptus grandis
Eucgr.D01949 10.0kb upstream 10.0kb upstream 16219 true Chr04: 33040717-33056935 Eucalyptus grandis
Eucgr.D01949 10.0kb upstream 10.0kb upstream 10000 false Chr04: 33040717-33050716 Eucalyptus grandis
Eucgr.D01949 10.0kb downstream 10.0kb downstream 16219 true Chr04: 33050717-33066935 Eucalyptus grandis
Eucgr.D01949 10.0kb downstream 10.0kb downstream 10000 false Chr04: 33056936-33066935 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062891 5270 Rosid View MSA
123739575 5271 Pentapetalae View MSA
122769957 5272 Eudicot View MSA
122045860 5273 Angiosperm View MSA
121348539 5274 Embryophyte View MSA
123380904 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.9364 0.0 31.3643    
cufflinks 12.5832 0.0 33.4189    
cufflinks 9.23194 0.0 21.2872    
cufflinks 9.34316 0.0 22.7467    
cufflinks 31.0226 0.0 76.7576   High
cufflinks 5.47896 0.0 13.8479   Low

0 Strain