Gene : Eucgr.D01883 E. grandis v2.0
Defline:  (1 of 20) PF07876 - Stress responsive A/B Barrel Domain (Dabb) Genomic Order:  1542
Name:  ? Eucgr.D01883 Secondary Identifier:  ? PAC:32052026
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D01883 0.5kb upstream 0.5kb upstream 3734 true Chr04: 32354308-32358041 Eucalyptus grandis
Eucgr.D01883 0.5kb upstream 0.5kb upstream 500 false Chr04: 32357542-32358041 Eucalyptus grandis
Eucgr.D01883 0.5kb downstream 0.5kb downstream 3734 true Chr04: 32353808-32357541 Eucalyptus grandis
Eucgr.D01883 0.5kb downstream 0.5kb downstream 500 false Chr04: 32353808-32354307 Eucalyptus grandis
Eucgr.D01883 1.0kb upstream 1.0kb upstream 4234 true Chr04: 32354308-32358541 Eucalyptus grandis
Eucgr.D01883 1.0kb upstream 1.0kb upstream 1000 false Chr04: 32357542-32358541 Eucalyptus grandis
Eucgr.D01883 1.0kb downstream 1.0kb downstream 4234 true Chr04: 32353308-32357541 Eucalyptus grandis
Eucgr.D01883 1.0kb downstream 1.0kb downstream 1000 false Chr04: 32353308-32354307 Eucalyptus grandis
Eucgr.D01883 2.0kb upstream 2.0kb upstream 5234 true Chr04: 32354308-32359541 Eucalyptus grandis
Eucgr.D01883 2.0kb upstream 2.0kb upstream 2000 false Chr04: 32357542-32359541 Eucalyptus grandis
Eucgr.D01883 2.0kb downstream 2.0kb downstream 5234 true Chr04: 32352308-32357541 Eucalyptus grandis
Eucgr.D01883 2.0kb downstream 2.0kb downstream 2000 false Chr04: 32352308-32354307 Eucalyptus grandis
Eucgr.D01883 5.0kb upstream 5.0kb upstream 8234 true Chr04: 32354308-32362541 Eucalyptus grandis
Eucgr.D01883 5.0kb upstream 5.0kb upstream 5000 false Chr04: 32357542-32362541 Eucalyptus grandis
Eucgr.D01883 5.0kb downstream 5.0kb downstream 8234 true Chr04: 32349308-32357541 Eucalyptus grandis
Eucgr.D01883 5.0kb downstream 5.0kb downstream 5000 false Chr04: 32349308-32354307 Eucalyptus grandis
Eucgr.D01883 10.0kb upstream 10.0kb upstream 13234 true Chr04: 32354308-32367541 Eucalyptus grandis
Eucgr.D01883 10.0kb upstream 10.0kb upstream 10000 false Chr04: 32357542-32367541 Eucalyptus grandis
Eucgr.D01883 10.0kb downstream 10.0kb downstream 13234 true Chr04: 32344308-32357541 Eucalyptus grandis
Eucgr.D01883 10.0kb downstream 10.0kb downstream 10000 false Chr04: 32344308-32354307 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064665 5270 Rosid View MSA
123740264 5271 Pentapetalae View MSA
122787104 5272 Eudicot View MSA
122046147 5273 Angiosperm View MSA
121347118 5274 Embryophyte View MSA
123426547 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.85153 0.0 7.92629    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.35771 0.0 4.07555    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 7.34698 0.0 18.6386   High

0 Strain