Gene : Eucgr.D01911 E. grandis v2.0
Defline:  (1 of 1) PTHR11669:SF5 - REPLICATION FACTOR C SUBUNIT 2 Genomic Order:  1566
Name:  ? Eucgr.D01911 Secondary Identifier:  ? PAC:32051891
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D01911 0.5kb upstream 0.5kb upstream 5171 true Chr04: 32561605-32566775 Eucalyptus grandis
Eucgr.D01911 0.5kb upstream 0.5kb upstream 500 false Chr04: 32561605-32562104 Eucalyptus grandis
Eucgr.D01911 0.5kb downstream 0.5kb downstream 5171 true Chr04: 32562105-32567275 Eucalyptus grandis
Eucgr.D01911 0.5kb downstream 0.5kb downstream 500 false Chr04: 32566776-32567275 Eucalyptus grandis
Eucgr.D01911 1.0kb upstream 1.0kb upstream 5671 true Chr04: 32561105-32566775 Eucalyptus grandis
Eucgr.D01911 1.0kb upstream 1.0kb upstream 1000 false Chr04: 32561105-32562104 Eucalyptus grandis
Eucgr.D01911 1.0kb downstream 1.0kb downstream 5671 true Chr04: 32562105-32567775 Eucalyptus grandis
Eucgr.D01911 1.0kb downstream 1.0kb downstream 1000 false Chr04: 32566776-32567775 Eucalyptus grandis
Eucgr.D01911 2.0kb upstream 2.0kb upstream 6671 true Chr04: 32560105-32566775 Eucalyptus grandis
Eucgr.D01911 2.0kb upstream 2.0kb upstream 2000 false Chr04: 32560105-32562104 Eucalyptus grandis
Eucgr.D01911 2.0kb downstream 2.0kb downstream 6671 true Chr04: 32562105-32568775 Eucalyptus grandis
Eucgr.D01911 2.0kb downstream 2.0kb downstream 2000 false Chr04: 32566776-32568775 Eucalyptus grandis
Eucgr.D01911 5.0kb upstream 5.0kb upstream 9671 true Chr04: 32557105-32566775 Eucalyptus grandis
Eucgr.D01911 5.0kb upstream 5.0kb upstream 5000 false Chr04: 32557105-32562104 Eucalyptus grandis
Eucgr.D01911 5.0kb downstream 5.0kb downstream 9671 true Chr04: 32562105-32571775 Eucalyptus grandis
Eucgr.D01911 5.0kb downstream 5.0kb downstream 5000 false Chr04: 32566776-32571775 Eucalyptus grandis
Eucgr.D01911 10.0kb upstream 10.0kb upstream 14671 true Chr04: 32552105-32566775 Eucalyptus grandis
Eucgr.D01911 10.0kb upstream 10.0kb upstream 10000 false Chr04: 32552105-32562104 Eucalyptus grandis
Eucgr.D01911 10.0kb downstream 10.0kb downstream 14671 true Chr04: 32562105-32576775 Eucalyptus grandis
Eucgr.D01911 10.0kb downstream 10.0kb downstream 10000 false Chr04: 32566776-32576775 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067480 5270 Rosid View MSA
123736933 5271 Pentapetalae View MSA
122797574 5272 Eudicot View MSA
122046702 5273 Angiosperm View MSA
121346724 5274 Embryophyte View MSA
123424586 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.6423 0.0 43.2187    
cufflinks 7.8448 0.0 18.7151    
cufflinks 19.237 0.0 44.208    
cufflinks 10.1047 0.0 23.5174    
cufflinks 22.728 0.0 51.5588    
cufflinks 3.47432 0.0 9.53999   Low

0 Strain