Gene : Eucgr.D01864 E. grandis v2.0
Defline:  (1 of 1) 4.3.1.17 - L-serine ammonia-lyase / Serine deaminase Genomic Order:  1526
Name:  ? Eucgr.D01864 Secondary Identifier:  ? PAC:32051940
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY0-1535 Eucalyptus grandis pathologic  
Egrandis PWY-6196 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D01864 0.5kb upstream 0.5kb upstream 3748 true Chr04: 32152140-32155887 Eucalyptus grandis
Eucgr.D01864 0.5kb upstream 0.5kb upstream 500 false Chr04: 32152140-32152639 Eucalyptus grandis
Eucgr.D01864 0.5kb downstream 0.5kb downstream 3748 true Chr04: 32152640-32156387 Eucalyptus grandis
Eucgr.D01864 0.5kb downstream 0.5kb downstream 500 false Chr04: 32155888-32156387 Eucalyptus grandis
Eucgr.D01864 1.0kb upstream 1.0kb upstream 4248 true Chr04: 32151640-32155887 Eucalyptus grandis
Eucgr.D01864 1.0kb upstream 1.0kb upstream 1000 false Chr04: 32151640-32152639 Eucalyptus grandis
Eucgr.D01864 1.0kb downstream 1.0kb downstream 4248 true Chr04: 32152640-32156887 Eucalyptus grandis
Eucgr.D01864 1.0kb downstream 1.0kb downstream 1000 false Chr04: 32155888-32156887 Eucalyptus grandis
Eucgr.D01864 2.0kb upstream 2.0kb upstream 5248 true Chr04: 32150640-32155887 Eucalyptus grandis
Eucgr.D01864 2.0kb upstream 2.0kb upstream 2000 false Chr04: 32150640-32152639 Eucalyptus grandis
Eucgr.D01864 2.0kb downstream 2.0kb downstream 5248 true Chr04: 32152640-32157887 Eucalyptus grandis
Eucgr.D01864 2.0kb downstream 2.0kb downstream 2000 false Chr04: 32155888-32157887 Eucalyptus grandis
Eucgr.D01864 5.0kb upstream 5.0kb upstream 8248 true Chr04: 32147640-32155887 Eucalyptus grandis
Eucgr.D01864 5.0kb upstream 5.0kb upstream 5000 false Chr04: 32147640-32152639 Eucalyptus grandis
Eucgr.D01864 5.0kb downstream 5.0kb downstream 8248 true Chr04: 32152640-32160887 Eucalyptus grandis
Eucgr.D01864 5.0kb downstream 5.0kb downstream 5000 false Chr04: 32155888-32160887 Eucalyptus grandis
Eucgr.D01864 10.0kb upstream 10.0kb upstream 13248 true Chr04: 32142640-32155887 Eucalyptus grandis
Eucgr.D01864 10.0kb upstream 10.0kb upstream 10000 false Chr04: 32142640-32152639 Eucalyptus grandis
Eucgr.D01864 10.0kb downstream 10.0kb downstream 13248 true Chr04: 32152640-32165887 Eucalyptus grandis
Eucgr.D01864 10.0kb downstream 10.0kb downstream 10000 false Chr04: 32155888-32165887 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063016 5270 Rosid View MSA
123740366 5271 Pentapetalae View MSA
122789012 5272 Eudicot View MSA
122046421 5273 Angiosperm View MSA
121344246 5274 Embryophyte View MSA
123427671 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.53724 0.0 13.9755    
cufflinks 0.859622 0.0 2.95559 Low Low
cufflinks 2.67419 0.0 8.17098    
cufflinks 1.8099 0.0 5.29426    
cufflinks 3.91333 0.0 10.3002    
cufflinks 21.1699 0.0 48.227   High

0 Strain