Gene : Eucgr.D01857 E. grandis v2.0
Defline:  (1 of 2) PTHR11592//PTHR11592:SF42 - GLUTATHIONE PEROXIDASE Genomic Order:  1520
Name:  ? Eucgr.D01857 Secondary Identifier:  ? PAC:32051971
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-4081 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D01857 0.5kb upstream 0.5kb upstream 3260 true Chr04: 32088917-32092176 Eucalyptus grandis
Eucgr.D01857 0.5kb upstream 0.5kb upstream 500 false Chr04: 32091677-32092176 Eucalyptus grandis
Eucgr.D01857 0.5kb downstream 0.5kb downstream 3260 true Chr04: 32088417-32091676 Eucalyptus grandis
Eucgr.D01857 0.5kb downstream 0.5kb downstream 500 false Chr04: 32088417-32088916 Eucalyptus grandis
Eucgr.D01857 1.0kb upstream 1.0kb upstream 3760 true Chr04: 32088917-32092676 Eucalyptus grandis
Eucgr.D01857 1.0kb upstream 1.0kb upstream 1000 false Chr04: 32091677-32092676 Eucalyptus grandis
Eucgr.D01857 1.0kb downstream 1.0kb downstream 3760 true Chr04: 32087917-32091676 Eucalyptus grandis
Eucgr.D01857 1.0kb downstream 1.0kb downstream 1000 false Chr04: 32087917-32088916 Eucalyptus grandis
Eucgr.D01857 2.0kb upstream 2.0kb upstream 4760 true Chr04: 32088917-32093676 Eucalyptus grandis
Eucgr.D01857 2.0kb upstream 2.0kb upstream 2000 false Chr04: 32091677-32093676 Eucalyptus grandis
Eucgr.D01857 2.0kb downstream 2.0kb downstream 4760 true Chr04: 32086917-32091676 Eucalyptus grandis
Eucgr.D01857 2.0kb downstream 2.0kb downstream 2000 false Chr04: 32086917-32088916 Eucalyptus grandis
Eucgr.D01857 5.0kb upstream 5.0kb upstream 7760 true Chr04: 32088917-32096676 Eucalyptus grandis
Eucgr.D01857 5.0kb upstream 5.0kb upstream 5000 false Chr04: 32091677-32096676 Eucalyptus grandis
Eucgr.D01857 5.0kb downstream 5.0kb downstream 7760 true Chr04: 32083917-32091676 Eucalyptus grandis
Eucgr.D01857 5.0kb downstream 5.0kb downstream 5000 false Chr04: 32083917-32088916 Eucalyptus grandis
Eucgr.D01857 10.0kb upstream 10.0kb upstream 12760 true Chr04: 32088917-32101676 Eucalyptus grandis
Eucgr.D01857 10.0kb upstream 10.0kb upstream 10000 false Chr04: 32091677-32101676 Eucalyptus grandis
Eucgr.D01857 10.0kb downstream 10.0kb downstream 12760 true Chr04: 32078917-32091676 Eucalyptus grandis
Eucgr.D01857 10.0kb downstream 10.0kb downstream 10000 false Chr04: 32078917-32088916 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066443 5270 Rosid View MSA
123752336 5271 Pentapetalae View MSA
122792727 5272 Eudicot View MSA
122049273 5273 Angiosperm View MSA
121349724 5274 Embryophyte View MSA
123426849 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 86.4791 0.0 208.476 High High
cufflinks 37.6777 0.0 98.7768    
cufflinks 68.3814 0.0 163.026 High  
cufflinks 29.458 0.0 67.0752   Low
cufflinks 52.785 0.0 127.635 High  
cufflinks 43.7859 0.0 98.5867 High  

0 Strain