Gene : Eucgr.L00153 E. grandis v2.0
Defline:  (1 of 2) PTHR11064:SF27 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2-RELATED Genomic Order:  929
Name:  ? Eucgr.L00153 Secondary Identifier:  ? PAC:32049628
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L00153 0.5kb upstream 0.5kb upstream 1977 true Chr04: 20329571-20331547 Eucalyptus grandis
Eucgr.L00153 0.5kb upstream 0.5kb upstream 500 false Chr04: 20331048-20331547 Eucalyptus grandis
Eucgr.L00153 0.5kb downstream 0.5kb downstream 1977 true Chr04: 20329071-20331047 Eucalyptus grandis
Eucgr.L00153 0.5kb downstream 0.5kb downstream 500 false Chr04: 20329071-20329570 Eucalyptus grandis
Eucgr.L00153 1.0kb upstream 1.0kb upstream 2477 true Chr04: 20329571-20332047 Eucalyptus grandis
Eucgr.L00153 1.0kb upstream 1.0kb upstream 1000 false Chr04: 20331048-20332047 Eucalyptus grandis
Eucgr.L00153 1.0kb downstream 1.0kb downstream 2477 true Chr04: 20328571-20331047 Eucalyptus grandis
Eucgr.L00153 1.0kb downstream 1.0kb downstream 1000 false Chr04: 20328571-20329570 Eucalyptus grandis
Eucgr.L00153 2.0kb upstream 2.0kb upstream 3477 true Chr04: 20329571-20333047 Eucalyptus grandis
Eucgr.L00153 2.0kb upstream 2.0kb upstream 2000 false Chr04: 20331048-20333047 Eucalyptus grandis
Eucgr.L00153 2.0kb downstream 2.0kb downstream 3477 true Chr04: 20327571-20331047 Eucalyptus grandis
Eucgr.L00153 2.0kb downstream 2.0kb downstream 2000 false Chr04: 20327571-20329570 Eucalyptus grandis
Eucgr.L00153 5.0kb upstream 5.0kb upstream 6477 true Chr04: 20329571-20336047 Eucalyptus grandis
Eucgr.L00153 5.0kb upstream 5.0kb upstream 5000 false Chr04: 20331048-20336047 Eucalyptus grandis
Eucgr.L00153 5.0kb downstream 5.0kb downstream 6477 true Chr04: 20324571-20331047 Eucalyptus grandis
Eucgr.L00153 5.0kb downstream 5.0kb downstream 5000 false Chr04: 20324571-20329570 Eucalyptus grandis
Eucgr.L00153 10.0kb upstream 10.0kb upstream 11477 true Chr04: 20329571-20341047 Eucalyptus grandis
Eucgr.L00153 10.0kb upstream 10.0kb upstream 10000 false Chr04: 20331048-20341047 Eucalyptus grandis
Eucgr.L00153 10.0kb downstream 10.0kb downstream 11477 true Chr04: 20319571-20331047 Eucalyptus grandis
Eucgr.L00153 10.0kb downstream 10.0kb downstream 10000 false Chr04: 20319571-20329570 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072305 5270 Rosid View MSA
123751737 5271 Pentapetalae View MSA
122797656 5272 Eudicot View MSA
122048596 5273 Angiosperm View MSA
123429094 5275 Viridiplantae View MSA
121350139 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.2211 0.0 25.9111    
cufflinks 1.9878 0.0 5.46628   Low
cufflinks 8.68699 0.0 20.5441    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 18.1966 0.0 40.6949    

0 Strain