Gene : Eucgr.D02590 E. grandis v2.0
Defline:  (1 of 1) PTHR11759:SF8 - 30S RIBOSOMAL PROTEIN S11-RELATED Genomic Order:  2163
Name:  ? Eucgr.D02590 Secondary Identifier:  ? PAC:32052086
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D02590 0.5kb upstream 0.5kb upstream 2148 true Chr04: 39867737-39869884 Eucalyptus grandis
Eucgr.D02590 0.5kb upstream 0.5kb upstream 500 false Chr04: 39869385-39869884 Eucalyptus grandis
Eucgr.D02590 0.5kb downstream 0.5kb downstream 2148 true Chr04: 39867237-39869384 Eucalyptus grandis
Eucgr.D02590 0.5kb downstream 0.5kb downstream 500 false Chr04: 39867237-39867736 Eucalyptus grandis
Eucgr.D02590 1.0kb upstream 1.0kb upstream 2648 true Chr04: 39867737-39870384 Eucalyptus grandis
Eucgr.D02590 1.0kb upstream 1.0kb upstream 1000 false Chr04: 39869385-39870384 Eucalyptus grandis
Eucgr.D02590 1.0kb downstream 1.0kb downstream 2648 true Chr04: 39866737-39869384 Eucalyptus grandis
Eucgr.D02590 1.0kb downstream 1.0kb downstream 1000 false Chr04: 39866737-39867736 Eucalyptus grandis
Eucgr.D02590 2.0kb upstream 2.0kb upstream 3648 true Chr04: 39867737-39871384 Eucalyptus grandis
Eucgr.D02590 2.0kb upstream 2.0kb upstream 2000 false Chr04: 39869385-39871384 Eucalyptus grandis
Eucgr.D02590 2.0kb downstream 2.0kb downstream 3648 true Chr04: 39865737-39869384 Eucalyptus grandis
Eucgr.D02590 2.0kb downstream 2.0kb downstream 2000 false Chr04: 39865737-39867736 Eucalyptus grandis
Eucgr.D02590 5.0kb upstream 5.0kb upstream 6648 true Chr04: 39867737-39874384 Eucalyptus grandis
Eucgr.D02590 5.0kb upstream 5.0kb upstream 5000 false Chr04: 39869385-39874384 Eucalyptus grandis
Eucgr.D02590 5.0kb downstream 5.0kb downstream 6648 true Chr04: 39862737-39869384 Eucalyptus grandis
Eucgr.D02590 5.0kb downstream 5.0kb downstream 5000 false Chr04: 39862737-39867736 Eucalyptus grandis
Eucgr.D02590 10.0kb upstream 10.0kb upstream 11648 true Chr04: 39867737-39879384 Eucalyptus grandis
Eucgr.D02590 10.0kb upstream 10.0kb upstream 10000 false Chr04: 39869385-39879384 Eucalyptus grandis
Eucgr.D02590 10.0kb downstream 10.0kb downstream 11648 true Chr04: 39857737-39869384 Eucalyptus grandis
Eucgr.D02590 10.0kb downstream 10.0kb downstream 10000 false Chr04: 39857737-39867736 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071530 5270 Rosid View MSA
123751156 5271 Pentapetalae View MSA
122793979 5272 Eudicot View MSA
122049746 5273 Angiosperm View MSA
121350914 5274 Embryophyte View MSA
123426853 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.0823 0.0 37.1033    
cufflinks 20.062 0.0 47.0943   High
cufflinks 13.3479 0.0 42.7198   Low
cufflinks 15.2902 0.0 42.7357    
cufflinks 19.2891 0.0 46.0231    
cufflinks 18.3453 0.0 44.2184    

0 Strain