Gene : Eucgr.D02588 E. grandis v2.0
Defline:  (1 of 4) PTHR11722 - 60S RIBOSOMAL PROTEIN L13 Genomic Order:  2161
Name:  ? Eucgr.D02588 Secondary Identifier:  ? PAC:32052270
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D02588 0.5kb upstream 0.5kb upstream 2902 true Chr04: 39854412-39857313 Eucalyptus grandis
Eucgr.D02588 0.5kb upstream 0.5kb upstream 500 false Chr04: 39856814-39857313 Eucalyptus grandis
Eucgr.D02588 0.5kb downstream 0.5kb downstream 2902 true Chr04: 39853912-39856813 Eucalyptus grandis
Eucgr.D02588 0.5kb downstream 0.5kb downstream 500 false Chr04: 39853912-39854411 Eucalyptus grandis
Eucgr.D02588 1.0kb upstream 1.0kb upstream 3402 true Chr04: 39854412-39857813 Eucalyptus grandis
Eucgr.D02588 1.0kb upstream 1.0kb upstream 1000 false Chr04: 39856814-39857813 Eucalyptus grandis
Eucgr.D02588 1.0kb downstream 1.0kb downstream 3402 true Chr04: 39853412-39856813 Eucalyptus grandis
Eucgr.D02588 1.0kb downstream 1.0kb downstream 1000 false Chr04: 39853412-39854411 Eucalyptus grandis
Eucgr.D02588 2.0kb upstream 2.0kb upstream 4402 true Chr04: 39854412-39858813 Eucalyptus grandis
Eucgr.D02588 2.0kb upstream 2.0kb upstream 2000 false Chr04: 39856814-39858813 Eucalyptus grandis
Eucgr.D02588 2.0kb downstream 2.0kb downstream 4402 true Chr04: 39852412-39856813 Eucalyptus grandis
Eucgr.D02588 2.0kb downstream 2.0kb downstream 2000 false Chr04: 39852412-39854411 Eucalyptus grandis
Eucgr.D02588 5.0kb upstream 5.0kb upstream 7402 true Chr04: 39854412-39861813 Eucalyptus grandis
Eucgr.D02588 5.0kb upstream 5.0kb upstream 5000 false Chr04: 39856814-39861813 Eucalyptus grandis
Eucgr.D02588 5.0kb downstream 5.0kb downstream 7402 true Chr04: 39849412-39856813 Eucalyptus grandis
Eucgr.D02588 5.0kb downstream 5.0kb downstream 5000 false Chr04: 39849412-39854411 Eucalyptus grandis
Eucgr.D02588 10.0kb upstream 10.0kb upstream 12402 true Chr04: 39854412-39866813 Eucalyptus grandis
Eucgr.D02588 10.0kb upstream 10.0kb upstream 10000 false Chr04: 39856814-39866813 Eucalyptus grandis
Eucgr.D02588 10.0kb downstream 10.0kb downstream 12402 true Chr04: 39844412-39856813 Eucalyptus grandis
Eucgr.D02588 10.0kb downstream 10.0kb downstream 10000 false Chr04: 39844412-39854411 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069609 5270 Rosid View MSA
123744377 5271 Pentapetalae View MSA
122791356 5272 Eudicot View MSA
122049765 5273 Angiosperm View MSA
121344371 5274 Embryophyte View MSA
123426358 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 262.661 0.0 626.589 High  
cufflinks 123.268 0.0 278.08 High Low
cufflinks 203.902 0.0 475.113 High  
cufflinks 202.241 0.0 470.78 High  
cufflinks 283.654 0.0 679.663 High High
cufflinks 166.468 0.0 381.63 High  

0 Strain