Gene : Eucgr.D02538 E. grandis v2.0
Defline:  (1 of 3) PTHR14155:SF74 - RING-H2 FINGER PROTEIN ATL45-RELATED Genomic Order:  2114
Name:  ? Eucgr.D02538 Secondary Identifier:  ? PAC:32049519
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D02538 0.5kb upstream 0.5kb upstream 1320 true Chr04: 39285164-39286483 Eucalyptus grandis
Eucgr.D02538 0.5kb upstream 0.5kb upstream 500 false Chr04: 39285984-39286483 Eucalyptus grandis
Eucgr.D02538 0.5kb downstream 0.5kb downstream 1320 true Chr04: 39284664-39285983 Eucalyptus grandis
Eucgr.D02538 0.5kb downstream 0.5kb downstream 500 false Chr04: 39284664-39285163 Eucalyptus grandis
Eucgr.D02538 1.0kb upstream 1.0kb upstream 1820 true Chr04: 39285164-39286983 Eucalyptus grandis
Eucgr.D02538 1.0kb upstream 1.0kb upstream 1000 false Chr04: 39285984-39286983 Eucalyptus grandis
Eucgr.D02538 1.0kb downstream 1.0kb downstream 1820 true Chr04: 39284164-39285983 Eucalyptus grandis
Eucgr.D02538 1.0kb downstream 1.0kb downstream 1000 false Chr04: 39284164-39285163 Eucalyptus grandis
Eucgr.D02538 2.0kb upstream 2.0kb upstream 2820 true Chr04: 39285164-39287983 Eucalyptus grandis
Eucgr.D02538 2.0kb upstream 2.0kb upstream 2000 false Chr04: 39285984-39287983 Eucalyptus grandis
Eucgr.D02538 2.0kb downstream 2.0kb downstream 2820 true Chr04: 39283164-39285983 Eucalyptus grandis
Eucgr.D02538 2.0kb downstream 2.0kb downstream 2000 false Chr04: 39283164-39285163 Eucalyptus grandis
Eucgr.D02538 5.0kb upstream 5.0kb upstream 5820 true Chr04: 39285164-39290983 Eucalyptus grandis
Eucgr.D02538 5.0kb upstream 5.0kb upstream 5000 false Chr04: 39285984-39290983 Eucalyptus grandis
Eucgr.D02538 5.0kb downstream 5.0kb downstream 5820 true Chr04: 39280164-39285983 Eucalyptus grandis
Eucgr.D02538 5.0kb downstream 5.0kb downstream 5000 false Chr04: 39280164-39285163 Eucalyptus grandis
Eucgr.D02538 10.0kb upstream 10.0kb upstream 10820 true Chr04: 39285164-39295983 Eucalyptus grandis
Eucgr.D02538 10.0kb upstream 10.0kb upstream 10000 false Chr04: 39285984-39295983 Eucalyptus grandis
Eucgr.D02538 10.0kb downstream 10.0kb downstream 10820 true Chr04: 39275164-39285983 Eucalyptus grandis
Eucgr.D02538 10.0kb downstream 10.0kb downstream 10000 false Chr04: 39275164-39285163 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073720 5270 Rosid View MSA
123747285 5271 Pentapetalae View MSA
122796390 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.585425 0.0 1.99452    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.487904 0.0 1.7326    
cufflinks 0.633651 0.0 2.1758    
cufflinks 1.35847 0.0 4.20184   High
cufflinks 0.80516 0.0 2.58945 Low  

0 Strain