Gene : Eucgr.D02553 E. grandis v2.0
Defline:  (1 of 1) PTHR12770:SF7 - PROTEIN ROOT UVB SENSITIVE 1 Genomic Order:  2129
Name:  ? Eucgr.D02553 Secondary Identifier:  ? PAC:32049885
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D02553 0.5kb upstream 0.5kb upstream 7408 true Chr04: 39456265-39463672 Eucalyptus grandis
Eucgr.D02553 0.5kb upstream 0.5kb upstream 500 false Chr04: 39456265-39456764 Eucalyptus grandis
Eucgr.D02553 0.5kb downstream 0.5kb downstream 7408 true Chr04: 39456765-39464172 Eucalyptus grandis
Eucgr.D02553 0.5kb downstream 0.5kb downstream 500 false Chr04: 39463673-39464172 Eucalyptus grandis
Eucgr.D02553 1.0kb upstream 1.0kb upstream 7908 true Chr04: 39455765-39463672 Eucalyptus grandis
Eucgr.D02553 1.0kb upstream 1.0kb upstream 1000 false Chr04: 39455765-39456764 Eucalyptus grandis
Eucgr.D02553 1.0kb downstream 1.0kb downstream 7908 true Chr04: 39456765-39464672 Eucalyptus grandis
Eucgr.D02553 1.0kb downstream 1.0kb downstream 1000 false Chr04: 39463673-39464672 Eucalyptus grandis
Eucgr.D02553 2.0kb upstream 2.0kb upstream 8908 true Chr04: 39454765-39463672 Eucalyptus grandis
Eucgr.D02553 2.0kb upstream 2.0kb upstream 2000 false Chr04: 39454765-39456764 Eucalyptus grandis
Eucgr.D02553 2.0kb downstream 2.0kb downstream 8908 true Chr04: 39456765-39465672 Eucalyptus grandis
Eucgr.D02553 2.0kb downstream 2.0kb downstream 2000 false Chr04: 39463673-39465672 Eucalyptus grandis
Eucgr.D02553 5.0kb upstream 5.0kb upstream 11908 true Chr04: 39451765-39463672 Eucalyptus grandis
Eucgr.D02553 5.0kb upstream 5.0kb upstream 5000 false Chr04: 39451765-39456764 Eucalyptus grandis
Eucgr.D02553 5.0kb downstream 5.0kb downstream 11908 true Chr04: 39456765-39468672 Eucalyptus grandis
Eucgr.D02553 5.0kb downstream 5.0kb downstream 5000 false Chr04: 39463673-39468672 Eucalyptus grandis
Eucgr.D02553 10.0kb upstream 10.0kb upstream 16908 true Chr04: 39446765-39463672 Eucalyptus grandis
Eucgr.D02553 10.0kb upstream 10.0kb upstream 10000 false Chr04: 39446765-39456764 Eucalyptus grandis
Eucgr.D02553 10.0kb downstream 10.0kb downstream 16908 true Chr04: 39456765-39473672 Eucalyptus grandis
Eucgr.D02553 10.0kb downstream 10.0kb downstream 10000 false Chr04: 39463673-39473672 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066620 5270 Rosid View MSA
123747441 5271 Pentapetalae View MSA
122789848 5272 Eudicot View MSA
122047870 5273 Angiosperm View MSA
121346132 5274 Embryophyte View MSA
123428813 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.77486 0.0 9.20384    
cufflinks 0.271213 0.0 0.873158 Low Low
cufflinks 4.13799 0.0 9.98341   High
cufflinks 0.64998 0.0 1.8794    
cufflinks 0.769009 0.0 2.19867    
cufflinks 2.28285 0.0 5.86076    

0 Strain