Gene : Eucgr.D02543 E. grandis v2.0
Defline:  (1 of 2) PTHR22731//PTHR22731:SF9 - RIBONUCLEASES P/MRP PROTEIN SUBUNIT POP1 Genomic Order:  2119
Name:  ? Eucgr.D02543 Secondary Identifier:  ? PAC:32050332
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D02543 0.5kb upstream 0.5kb upstream 5853 true Chr04: 39357226-39363078 Eucalyptus grandis
Eucgr.D02543 0.5kb upstream 0.5kb upstream 500 false Chr04: 39362579-39363078 Eucalyptus grandis
Eucgr.D02543 0.5kb downstream 0.5kb downstream 5853 true Chr04: 39356726-39362578 Eucalyptus grandis
Eucgr.D02543 0.5kb downstream 0.5kb downstream 500 false Chr04: 39356726-39357225 Eucalyptus grandis
Eucgr.D02543 1.0kb upstream 1.0kb upstream 6353 true Chr04: 39357226-39363578 Eucalyptus grandis
Eucgr.D02543 1.0kb upstream 1.0kb upstream 1000 false Chr04: 39362579-39363578 Eucalyptus grandis
Eucgr.D02543 1.0kb downstream 1.0kb downstream 6353 true Chr04: 39356226-39362578 Eucalyptus grandis
Eucgr.D02543 1.0kb downstream 1.0kb downstream 1000 false Chr04: 39356226-39357225 Eucalyptus grandis
Eucgr.D02543 2.0kb upstream 2.0kb upstream 7353 true Chr04: 39357226-39364578 Eucalyptus grandis
Eucgr.D02543 2.0kb upstream 2.0kb upstream 2000 false Chr04: 39362579-39364578 Eucalyptus grandis
Eucgr.D02543 2.0kb downstream 2.0kb downstream 7353 true Chr04: 39355226-39362578 Eucalyptus grandis
Eucgr.D02543 2.0kb downstream 2.0kb downstream 2000 false Chr04: 39355226-39357225 Eucalyptus grandis
Eucgr.D02543 5.0kb upstream 5.0kb upstream 10353 true Chr04: 39357226-39367578 Eucalyptus grandis
Eucgr.D02543 5.0kb upstream 5.0kb upstream 5000 false Chr04: 39362579-39367578 Eucalyptus grandis
Eucgr.D02543 5.0kb downstream 5.0kb downstream 10353 true Chr04: 39352226-39362578 Eucalyptus grandis
Eucgr.D02543 5.0kb downstream 5.0kb downstream 5000 false Chr04: 39352226-39357225 Eucalyptus grandis
Eucgr.D02543 10.0kb upstream 10.0kb upstream 15353 true Chr04: 39357226-39372578 Eucalyptus grandis
Eucgr.D02543 10.0kb upstream 10.0kb upstream 10000 false Chr04: 39362579-39372578 Eucalyptus grandis
Eucgr.D02543 10.0kb downstream 10.0kb downstream 15353 true Chr04: 39347226-39362578 Eucalyptus grandis
Eucgr.D02543 10.0kb downstream 10.0kb downstream 10000 false Chr04: 39347226-39357225 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069043 5270 Rosid View MSA
123740303 5271 Pentapetalae View MSA
122791555 5272 Eudicot View MSA
122047231 5273 Angiosperm View MSA
121344727 5274 Embryophyte View MSA
123380091 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.19598 0.0 3.29525    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.837652 0.0 2.38188    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 4.00467 0.0 9.8655   High

0 Strain