Gene : Eucgr.D02512 E. grandis v2.0
Defline:  (1 of 1) PTHR12084 - NUCLEAR PORE GLYCOPROTEIN P62-RELATED Genomic Order:  2096
Name:  ? Eucgr.D02512 Secondary Identifier:  ? PAC:32049926
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D02512 0.5kb upstream 0.5kb upstream 9625 true Chr04: 39103209-39112833 Eucalyptus grandis
Eucgr.D02512 0.5kb upstream 0.5kb upstream 500 false Chr04: 39112334-39112833 Eucalyptus grandis
Eucgr.D02512 0.5kb downstream 0.5kb downstream 9625 true Chr04: 39102709-39112333 Eucalyptus grandis
Eucgr.D02512 0.5kb downstream 0.5kb downstream 500 false Chr04: 39102709-39103208 Eucalyptus grandis
Eucgr.D02512 1.0kb upstream 1.0kb upstream 10125 true Chr04: 39103209-39113333 Eucalyptus grandis
Eucgr.D02512 1.0kb upstream 1.0kb upstream 1000 false Chr04: 39112334-39113333 Eucalyptus grandis
Eucgr.D02512 1.0kb downstream 1.0kb downstream 10125 true Chr04: 39102209-39112333 Eucalyptus grandis
Eucgr.D02512 1.0kb downstream 1.0kb downstream 1000 false Chr04: 39102209-39103208 Eucalyptus grandis
Eucgr.D02512 2.0kb upstream 2.0kb upstream 11125 true Chr04: 39103209-39114333 Eucalyptus grandis
Eucgr.D02512 2.0kb upstream 2.0kb upstream 2000 false Chr04: 39112334-39114333 Eucalyptus grandis
Eucgr.D02512 2.0kb downstream 2.0kb downstream 11125 true Chr04: 39101209-39112333 Eucalyptus grandis
Eucgr.D02512 2.0kb downstream 2.0kb downstream 2000 false Chr04: 39101209-39103208 Eucalyptus grandis
Eucgr.D02512 5.0kb upstream 5.0kb upstream 14125 true Chr04: 39103209-39117333 Eucalyptus grandis
Eucgr.D02512 5.0kb upstream 5.0kb upstream 5000 false Chr04: 39112334-39117333 Eucalyptus grandis
Eucgr.D02512 5.0kb downstream 5.0kb downstream 14125 true Chr04: 39098209-39112333 Eucalyptus grandis
Eucgr.D02512 5.0kb downstream 5.0kb downstream 5000 false Chr04: 39098209-39103208 Eucalyptus grandis
Eucgr.D02512 10.0kb upstream 10.0kb upstream 19125 true Chr04: 39103209-39122333 Eucalyptus grandis
Eucgr.D02512 10.0kb upstream 10.0kb upstream 10000 false Chr04: 39112334-39122333 Eucalyptus grandis
Eucgr.D02512 10.0kb downstream 10.0kb downstream 19125 true Chr04: 39093209-39112333 Eucalyptus grandis
Eucgr.D02512 10.0kb downstream 10.0kb downstream 10000 false Chr04: 39093209-39103208 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066082 5270 Rosid View MSA
123740016 5271 Pentapetalae View MSA
122794564 5272 Eudicot View MSA
122044271 5273 Angiosperm View MSA
121348594 5274 Embryophyte View MSA
123427472 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.8015 0.0 20.2077    
cufflinks 3.25583 0.0 8.17803   Low
cufflinks 7.5099 0.0 17.4933    
cufflinks 5.80856 0.0 13.8195    
cufflinks 8.22394 0.0 18.9809    
cufflinks 11.7856 0.0 26.576   High

0 Strain